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NECEvent2014_2_3_scaffold_225

Alias: 172_003_scaffold_225

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_225_1
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..98)
DNA (96bp) protein (32aa)
Transposase n=2 Tax=Atopobium sp. ICM58 RepID=J2YXG9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EPD73595.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NECEvent2014_2_3_scaffold_225_2
Actinomyces sp. oral taxon 178, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(138..1331)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 178 str. F0338 RepID=E8JGV1_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EFW10291.1}; TaxID=888051 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 178 str. F03
hypothetical protein
NECEvent2014_2_3_scaffold_225_3
unknown

Not on your lists

comp(1469..2191)
DNA (723bp) protein (241aa)

This feature has no annotations

NECEvent2014_2_3_scaffold_225_4
Pseudonocardia sp. P1, Pseudonocardia, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2303..2977)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFED8C
NECEvent2014_2_3_scaffold_225_5
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3152..4234)
DNA (1083bp) protein (361aa)
Ribosome-binding ATPase YchF n=1 Tax=Actinomyces sp. ICM39 RepID=J3EER3_9ACTO rbh
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
GTP-binding protein YchF
NECEvent2014_2_3_scaffold_225_6
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4272..5339)
DNA (1068bp) protein (356aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxI
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZCS1_9ACTO rbh
NECEvent2014_2_3_scaffold_225_7
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5692..6876
DNA (1185bp) protein (395aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclea
Exodeoxyribonuclease 7 large subunit n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZVY2_9ACTO rbh
exodeoxyribonuclease VII large subunit
NECEvent2014_2_3_scaffold_225_8
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6933..7163
DNA (231bp) protein (77aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclea
Exodeoxyribonuclease 7 small subunit n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZBU4_9ACTO
exodeoxyribonuclease VII small subunit
NECEvent2014_2_3_scaffold_225_9
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7207..8142
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S3ADF3_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD74209.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
PfkB domain-containing protein
NECEvent2014_2_3_scaffold_225_10
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8226..8987)
DNA (762bp) protein (254aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.
Isoprenyl transferase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZIT2_9ACTO rbh
UDP pyrophosphate synthase
NECEvent2014_2_3_scaffold_225_11
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9174..9857
DNA (684bp) protein (228aa)
Hemolysin III family channel protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZCS6_9ACTO rbh
Hemolysin III family channel protein {ECO:0000313|EMBL:EPD74211.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;
Hly-III family protein
NECEvent2014_2_3_scaffold_225_12
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9971..10450
DNA (480bp) protein (160aa)
Transcription elongation factor GreA n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZVY5_9ACTO rbh
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1203556 species="Bacteri
transcription elongation factor GreA
NECEvent2014_2_3_scaffold_225_13
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10551..12035)
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZBV0_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD74213.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
integral membrane protein
NECEvent2014_2_3_scaffold_225_14
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12136..12762
DNA (627bp) protein (209aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
methionine sulfoxide reductase A (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Actinomyces sp. HPA0247 RepID=S3ADG1_9ACTO rbh
NECEvent2014_2_3_scaffold_225_15
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12838..13236)
DNA (399bp) protein (133aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1203556 species="Bacteria; Actinobacteria; Actino
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZIU2_9ACTO
peptidylprolyl isomerase FKBP-type
NECEvent2014_2_3_scaffold_225_16
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13274..14260)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZCT1_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD74216.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_3_scaffold_225_trna_1
unknown

Not on your lists

comp(14417..14490)
DNA (74bp)
transferRNA
NECEvent2014_2_3_scaffold_225_17
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14544..15512)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZVZ0_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD74217.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
Ppx/GppA phosphatase
NECEvent2014_2_3_scaffold_225_18
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15573..16082)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZBV3_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD74218.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_3_scaffold_225_19
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16079..16828)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S3ADG4_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD74219.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_2_3_scaffold_225_20
Atopobium sp. ICM58, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16936..18276)
DNA (1341bp) protein (447aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
eno; enolase (EC:4.2.1.11)
Enolase n=1 Tax=Atopobium sp. ICM58 RepID=J3EL76_9ACTN rbh
NECEvent2014_2_3_scaffold_225_21
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18398..18991)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZCT3_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD74221.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NECEvent2014_2_3_scaffold_225_22
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19052..22636)
DNA (3585bp) protein (1195aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1203556 species="Bacteria; A
Transcription-repair-coupling factor n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZVZ3_9ACTO rbh
transcription-repair coupling factor
NECEvent2014_2_3_scaffold_225_23
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22694..23296)
DNA (603bp) protein (201aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZBV9_9ACTO rbh
NECEvent2014_2_3_scaffold_225_24
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23286..24149)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S3ADG7_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD74224.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
GDSL-like protein
Displaying 25 items

View Taxonomy