ggKbase home page
Advanced Search
Search Help

NECEvent2014_2_3_scaffold_59_2

Organism: NECEvent2014_2_3_Actinomyces_HPA0247_66_505

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: 701..4177

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 999.99
  • Bit_score: 2282
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZH18_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 999.99
  • Bit_score: 2283
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 999.99
  • Bit_score: 1745
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Actinomyces sp. HPA0247 → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3477
TTGGCTGCCAACAGCACCGCCAAACAGCCCAAGCACCGCATCTCATTCGCCAAGCTTCGTGAACCCCTCCAGGCCCCCAATCTGCTGGGCCTGCAGGTCGAAAGCTTCGACTGGCTGCTGGGTAACGACGCGTGGAAGGCCCGCGTCGAAGCCGCTCAGGCATCCGGCCGCAACGACGTCCCCGACGTCTCCGGCCTCGAAGAAATCTTCCACGAGATTTCCCCCATTGAGGACGTCGCAGGCACCATGAGCCTGTCGTTCCACGACCACCGCCTCGAATCCCCCAAGTACTCCATGGAGGAAGCCAAGGCGAAGGACTACACGTACTCCGCACCCATGTACGTGACCGCCGAGTTCATGAACTACGAGACCGGCGAAATCAAGTCCCAGACCGTGTTCATGGGCGACTTCCCGCTCATGACCCCCCGCGGTACCTTCATCATCAACGGCACCGAGCGTGTCGTCGTCTCCCAGCTCGTGCGTTCCCCCGGCGTGTACTTCGAGAAGCTCTCGGACCGCTCGTCGGACAAGGAGACCTTCGGTGCGAAGGTCATCCCCTCGCGTGGCGCATGGCTCGAGTTCGAGATCGACAAGCGTGACACCGTCGGCGTGCGCATCGACCGCAAGCGTAAGCAGTCGGTGACCCACTTCCTCAAGGCCGTCGGCATGACCGAATCCGAGATTCGCGAGACCTTCGCCGACTACCCGGTCCTCCTCGAGACCCTCGAGAAGGACACGGTCGCCACGCAGGAAGAGGCCCTGCTCGACATCTACCGCAAGCTGCGCCCCGGCGAGCCTGCGAACGTCGACGCCGCCCAGACGCTGCTCAACAACTTCTACTTCGACTCTCGTCGCTACGACCTCGCCAAGGTCGGCCGCTACAAGATCAACAAGAAGCTGGCCATCGAAGCCGACCCCAAGGCCTCGACCCTGTCCCTCGAGGACATCGTCGCGACCGTCAAGTACCTCCTCGCCCTGCACCAGGGCGACAAGACCTTCGCCGGCACCCGCAATGGCGAGCCCGTCGAGGTTCGCGTTGAGGTTGACGACATCGACAACTTCGCCAACCGTCGTATCCGCGCCGTCGGCGAGCTCATCCAGGGCCAGGTCCGCACGGGCCTCGCCCGCATGGAGCGCACCGTGCGCGAGCGCATGACCACCCAGGAGACGGACTCGATCACGCCCCAGACGCTGATCAACATCCGCCCCGTCGTGGCCGCGATCAAGGAGTTCTTCGGAACCTCCCAGCTCTCGCAGTTCATGGACCAGAACAACCCGCTGGCCGGCCTGACCCACAAGCGCCGTCTGTCGGCCCTGGGCCCCGGCGGTCTGTCCCGTGACCGCGCGGGCATGGAAGTGCGAGACGTCCACCCCTCGCACTACGGCCGCATGTGCCCGATCGAGTCCCCTGAAGGCCCGAACATCGGCCTCATCGGCTCGCTCGCGACCTTCGCGCGCATCAACCCCTTCGGCTTCATTGAGACGCCGTACCGCGTCGTCACGGACGGCAAGGTCACCGACGAAATCCGCTACCTCACCGCGGACGACGAGAAGGGGCACTTCATCGCCCAGGCCTCGTCGCCCCTCGAGGCCGACGGCTCCTTCGCCGAGCACGACGTCCTGTGCCGTGTCGCCGGTGAAGACCCGACCCTGATCGCCCGCGATCGCGTCGACTACATGGACGTGTCCGCACGTCAGATGGTGTCCGTCGCCGCGGCGTTCATTCCCTTCCTGGAGCACGACGACGCGAACCGAGCCCTCATGGGCGCGAACATGCAGCGTCAGGCCGTGCCGCTGCTCACCACGGAAGCCCCGCTGGTCGGCACCGGCATGGAGATGCGCGCCGCGCACGACTCCGGCGAAATGATCCTCGCCGCCCACTCCGGCGTCGTCTCCGAGGTCTCCGCGGACCTGATCGTCGTCTCCACGGACGAGGGCGGCCGCGACTCCTACCGCCTCGAGAAGTTCGAGCGCTCCAACCCCGGTAACTGCACCAACCAGCGCGTTATCGTGGACGAGGGCGACCGCGTCGAGGTCGGCGACGTCCTGGCCGACGGCCCCGCCACCTCCAACGGTGAGGTCGCGCTCGGTAAGAACCTGCTCGTCGCCTACATGTCGTGGGAAGGCCTCAACTACGAGGACGCCATCATCCTGAGCCGTCGCGTCGTGGAAGAGGACATCCTCACCTCGATCCACATCGAGGAATACGAGGTCGACGCCCGCGAGACCAAGCTCGGTGAGGAAGAAATCACCCGCGATATCCCCAACGTCTCCGAGGAATCCCTCGCAGACCTGGACGAGCGCGGCATCATCCGCATCGGCGCCGAGGTCACCGCCGGCGACATCCTCGTCGGTAAGGTCACCCCGAAGGGCGAGACCGAGCTGACCTCCGAAGAGCGCCTGCTGCGCGCCATCTTCGGCGAGAAGGCCCGCGAGGTGCGCGACACCTCCCTGCGCGTCCCCCACGGCGAAGAAGGCATCGTCATCGGCGTCCGCGAATTCAACGACGACGAAGACGACCTCAACCCCGGCGTCCGCCAGACCGTGCGCGTCTACGTCGCCCAGCGACGCAAGATCACGATCGGCGACAAGATGGCCGGCCGTCACGGCAACAAGGGCGTCGTGTCCAAGATCCTCCCGGTCGAGGACATGCCCTTCCTCGCCGACGGCACGCCCGTCGACATCATCCTCAACCCGCTGGGCGTCCCCGGCCGAATGAACGTCGGCCAGGTGCTCGAGTACCACCTCGGGTGGCTCGCCCACCAGGGCTGGGATGCCTCGGCCGCTGTCGAGGCCGGCGAAGAGTGGGCAGCGCACCTGCCCGCCGACGGCATCAAGACCGAGCCCGGCACCCACGTCGCCACCCCCGTGTTCGACGGCCTCGAGGCCGACGAGCTTGCGGGCCTGCTGCGCAACGTGAACCCGAACCGCGACGGCGACGTCCTCACCAACTACGAGGGCAAGGCGCGCCTCTTCGACGGTCGCTCCGGCGAGCCGTTCCCGTACCCGATCTCGGTGGGCTACACCTACATGCTCAAGCTCCACCACCTGGTCGACGACAAGATCCACGCCCGCTCCACGGGCCCGTACTCGATGATCACGCAGCAGCCGCTGGGCGGTAAGGCCCAGTTCGGCGGCCAGCGCTTCGGCGAGATGGAGGTGTGGGCCCTGGAAGCCTACGGCGCCGCCTACGCCCTCCAGGAGCTGCTGACCATCAAGTCCGACGACACCACCGGCCGCGTGAAGGTGTACGAGGCCATCGTCAAGGGCGAGGACATCCCCGAGCCCGGCATCCCCGAGTCCTTCCGAGTCCTCATCCAGGAAATGCGCTCGCTGTGCCTGAACGTCGAAGCTCTCGACGCGGCCGGCAACGTCATTGACCTGCGTGAGCAGGACGAAGACTTCAATGCGCGTGAGGACCTGGGCATCACCCTTGATGCTCGTCCGAACGCTGCGGCGACCATCGATGCGATCTGA
PROTEIN sequence
Length: 1159
LAANSTAKQPKHRISFAKLREPLQAPNLLGLQVESFDWLLGNDAWKARVEAAQASGRNDVPDVSGLEEIFHEISPIEDVAGTMSLSFHDHRLESPKYSMEEAKAKDYTYSAPMYVTAEFMNYETGEIKSQTVFMGDFPLMTPRGTFIINGTERVVVSQLVRSPGVYFEKLSDRSSDKETFGAKVIPSRGAWLEFEIDKRDTVGVRIDRKRKQSVTHFLKAVGMTESEIRETFADYPVLLETLEKDTVATQEEALLDIYRKLRPGEPANVDAAQTLLNNFYFDSRRYDLAKVGRYKINKKLAIEADPKASTLSLEDIVATVKYLLALHQGDKTFAGTRNGEPVEVRVEVDDIDNFANRRIRAVGELIQGQVRTGLARMERTVRERMTTQETDSITPQTLINIRPVVAAIKEFFGTSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPIESPEGPNIGLIGSLATFARINPFGFIETPYRVVTDGKVTDEIRYLTADDEKGHFIAQASSPLEADGSFAEHDVLCRVAGEDPTLIARDRVDYMDVSARQMVSVAAAFIPFLEHDDANRALMGANMQRQAVPLLTTEAPLVGTGMEMRAAHDSGEMILAAHSGVVSEVSADLIVVSTDEGGRDSYRLEKFERSNPGNCTNQRVIVDEGDRVEVGDVLADGPATSNGEVALGKNLLVAYMSWEGLNYEDAIILSRRVVEEDILTSIHIEEYEVDARETKLGEEEITRDIPNVSEESLADLDERGIIRIGAEVTAGDILVGKVTPKGETELTSEERLLRAIFGEKAREVRDTSLRVPHGEEGIVIGVREFNDDEDDLNPGVRQTVRVYVAQRRKITIGDKMAGRHGNKGVVSKILPVEDMPFLADGTPVDIILNPLGVPGRMNVGQVLEYHLGWLAHQGWDASAAVEAGEEWAAHLPADGIKTEPGTHVATPVFDGLEADELAGLLRNVNPNRDGDVLTNYEGKARLFDGRSGEPFPYPISVGYTYMLKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDDTTGRVKVYEAIVKGEDIPEPGIPESFRVLIQEMRSLCLNVEALDAAGNVIDLREQDEDFNAREDLGITLDARPNAAATIDAI*