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NECEvent2014_2_3_scaffold_59

Alias: 172_003_scaffold_59

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Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_59_1
Actinomyces sp. oral taxon 172, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..92
DNA (90bp) protein (30aa)
Transposase n=1 Tax=Actinomyces sp. ICM47 RepID=J1LQB9_9ACTO
Transposase {ECO:0000313|EMBL:ERH31144.1}; TaxID=1321775 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 172 str. F0311.;"
NECEvent2014_2_3_scaffold_59_2
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

701..4177
DNA (3477bp) protein (1159aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZH18_9ACTO rbh
DNA-directed RNA polymerase subunit beta
NECEvent2014_2_3_scaffold_59_3
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4193..8095
DNA (3903bp) protein (1301aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
rpoC; DNA-directed RNA polymerase (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Actinomyces sp. HPA0247 RepID=S3ABK4_9ACTO rbh
NECEvent2014_2_3_scaffold_59_4
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8637..9128)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZA10_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD73628.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NECEvent2014_2_3_scaffold_59_5
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10454..10924
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZUC1_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD73627.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
cation/multidrug efflux pump
NECEvent2014_2_3_scaffold_59_6
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11364..12812
DNA (1449bp) protein (483aa)
LPXTG-domain-containing protein cell wall anchor domain n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZB55_9ACTO rbh
LPXTG-domain-containing protein cell wall anchor domain {ECO:0000313|EMBL:EPD73626.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actino
hypothetical protein
NECEvent2014_2_3_scaffold_59_7
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13162..16113
DNA (2952bp) protein (984aa)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7B9Q0_9ACTO rbh
Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:EDN79924.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyc
beta-glucosidase-related glycosidase
NECEvent2014_2_3_scaffold_59_8
Atopobium sp. ICM58, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


16642..17016
DNA (375bp) protein (125aa)
30S ribosomal protein S12 n=8 Tax=Actinobacteria RepID=A7B9P9_9ACTO
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;
rpsL; 30S ribosomal protein S12
NECEvent2014_2_3_scaffold_59_9
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


17016..17486
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=7 Tax=Actinobacteria RepID=A7B9P8_9ACTO rbh
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
30S ribosomal protein S7
NECEvent2014_2_3_scaffold_59_10
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17567..19690
DNA (2124bp) protein (708aa)
Elongation factor G n=1 Tax=Actinomyces sp. oral taxon 180 str. F0310 RepID=E6KU45_9ACTO rbh
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;"
fusA; elongation factor EF2
NECEvent2014_2_3_scaffold_59_11
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19837..21024
DNA (1188bp) protein (396aa)
Elongation factor Tu n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZH07_9ACTO rbh
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales;
translation elongation factor GTPase
NECEvent2014_2_3_scaffold_59_12
Atopobium sp. ICM58, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


21582..21890
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=9 Tax=Actinobacteria RepID=A7B9P5_9ACTO
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM58.;
30S ribosomal protein S10
NECEvent2014_2_3_scaffold_59_13
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


21902..22567
DNA (666bp) protein (222aa)
50S ribosomal protein L3 n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZA01_9ACTO rbh
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Ac
rplC; 50S ribosomal protein L3
NECEvent2014_2_3_scaffold_59_14
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


22570..23214
DNA (645bp) protein (215aa)
50S ribosomal protein L4 n=3 Tax=Actinomyces RepID=A7B9P3_9ACTO rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 179
rplD; 50S ribosomal protein L4
NECEvent2014_2_3_scaffold_59_15
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


23211..23516
DNA (306bp) protein (102aa)
50S ribosomal protein L23 n=5 Tax=Actinomyces RepID=A7B9P2_9ACTO
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17
ribosomal protein L25/L23
NECEvent2014_2_3_scaffold_59_16
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


23539..24375
DNA (837bp) protein (279aa)
50S ribosomal protein L2 n=3 Tax=Actinomyces RepID=E6KU51_9ACTO rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
50S ribosomal protein L2
NECEvent2014_2_3_scaffold_59_17
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


24392..24673
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=8 Tax=Actinobacteria RepID=A7B9P0_9ACTO
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
30S ribosomal protein S19
NECEvent2014_2_3_scaffold_59_18
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


24703..25074
DNA (372bp) protein (124aa)
50S ribosomal protein L22 n=7 Tax=Actinobacteria RepID=A7B9N9_9ACTO
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Ac
50S ribosomal protein L22
NECEvent2014_2_3_scaffold_59_19
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


25076..25885
DNA (810bp) protein (270aa)
30S ribosomal protein S3 n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZUA4_9ACTO rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
30S ribosomal protein S3
NECEvent2014_2_3_scaffold_59_20
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


25891..26310
DNA (420bp) protein (140aa)
50S ribosomal protein L16 n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZB38_9ACTO
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Ac
rplP; 50S ribosomal protein L16
NECEvent2014_2_3_scaffold_59_21
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


26310..26543
DNA (234bp) protein (78aa)
50S ribosomal protein L29 n=6 Tax=Actinobacteria RepID=A7B9N6_9ACTO
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17
rpmC; 50S ribosomal protein L29
NECEvent2014_2_3_scaffold_59_22
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


26549..26815
DNA (267bp) protein (89aa)
30S ribosomal protein S17 n=7 Tax=Actinobacteria RepID=A7B9N5_9ACTO
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Ac
30S ribosomal protein S17
NECEvent2014_2_3_scaffold_59_23
Atopobium sp. ICM58, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


26904..27272
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=7 Tax=Actinobacteria RepID=A7B9N4_9ACTO
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;
rplN; 50S ribosomal protein L14
NECEvent2014_2_3_scaffold_59_24
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


27276..27707
DNA (432bp) protein (144aa)
50S ribosomal protein L24 n=1 Tax=Actinomyces sp. ICM39 RepID=J3EEM9_9ACTO
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
50S ribosomal protein L24P
NECEvent2014_2_3_scaffold_59_25
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


27710..28255
DNA (546bp) protein (182aa)
50S ribosomal protein L5 n=4 Tax=Actinobacteria RepID=J0SJL0_9ACTO rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
50S ribosomal protein L5
NECEvent2014_2_3_scaffold_59_26
Actinomyces sp. ICM47, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


28259..28444
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=8 Tax=Actinobacteria RepID=A7B9N1_9ACTO
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=936548 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" sou
30S ribosomal protein S14
NECEvent2014_2_3_scaffold_59_27
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


28534..28905
DNA (372bp) protein (124aa)
30S ribosomal protein S8 n=4 Tax=Actinobacteria RepID=J2Z8N3_9ACTO
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
30S ribosomal protein S8
NECEvent2014_2_3_scaffold_59_28
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


28921..29463
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z9Y5_9ACTO rbh
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Ac
50S ribosomal protein L6
NECEvent2014_2_3_scaffold_59_29
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


29463..29834
DNA (372bp) protein (124aa)
50S ribosomal protein L18 n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZU94_9ACTO
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
50S ribosomal protein L18
NECEvent2014_2_3_scaffold_59_30
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


29863..30552
DNA (690bp) protein (230aa)
30S ribosomal protein S5 n=5 Tax=Actinobacteria RepID=J0STI0_9ACTO rbh
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Ac
30S ribosomal protein S5
Displaying items 1-30 of 58 in total

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