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NECEvent2014_2_3_scaffold_59_3

Organism: NECEvent2014_2_3_Actinomyces_HPA0247_66_505

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: 4193..8095

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 999.99
  • Bit_score: 2559
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 999.99
  • Bit_score: 1816
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Actinomyces sp. HPA0247 RepID=S3ABK4_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 999.99
  • Bit_score: 2560
  • Evalue 0.0
  • rbh

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Taxonomy

Actinomyces sp. HPA0247 → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3903
TTGCTGGACGCCAAAACGTTCGACAGCCTGAAGATCACCCTGGCCACCGGCGACGACATCGCCGTCTGGAGCCACGGTGAGGTCAAGAAGCCGGAGACCATCAACTACCGTACGCTCAAGCCCGAGCGCGACGGCCTGTTCGGTGAGCAGATCTTCGGTCCCACGCGCGACTGGGAGTGCGCGTGTGGCAAGTACAAGCGCGTGCGCTACAAGGGCATCATCTGCGAGAAGTGTGGAGTCGAGGTCACTCGCTCCCGCGTCCGCCGTGAGCGCATGGGTCACATCGACCTCGCCGCCCCCGTCACGCACATCTGGTACTTCAAGGGTGTTCCCTCGCGCCTGGGCTACGTGCTCAACCTCGCGCCCAAGGACCTCGAGAAGGTCATCTACTTCGCTGCCTACATGATCACCGAGGTCGACGAAAAGGGTCGCCACGAGGATCTGGCTGAACTGCGCGCCGAACTCGAAGTGCAGAAGAAGCAGATGGAGAACAACCGCGACGCGACGATCAACGACTTCGCGGAGCAGCTCGAGTCCGACATGGCCGCCCTGGAGAAGGACGGCGCCTCGCAGGCCGAGCGCGAGCGCGCTCGCAAGCAGGGCGAGCGTGAGATGGCCAAGATTCGTCGCCGCTTCGACGGCGACATCGAAGGCCTCGAGGCCGTGTGGGAGCGCTTCAAGGACCTCAAGGTCGGCGACCTTGAGGGCGACGAGCGCCTCTACCGTGCGATGGTGGCCCGCTACGGCACCTACTTCAAGGGTGACATGGGCGCTGCCGCCATCCAGAAGCGCCTGGAGACCTTCGACCTGGAGGCCGAGGTCGCCGCGCTGCGTCAGACCATCGCCTCTGACTCCGGCCCGCGCAAGGCTCGCGCCATCAAGCGTCTGAAGGTCATCAACGCCTTCGTCGCGACCGGCAACTCGCCGGCCTCGATGGTCCTCACCAAGATCCCCGTGATCCCGCCGGACCTGCGTCCGATGGTTCAGCTGGACGGCGGCCGCTTCGCGACCTCCGACCTCAACGACCTGTACCGTCGCGTCATCAACCGCAACACCCGACTCAAGCGTCTGCTCGAGCTGGGCGCCCCCGAGATCATCGTCAACAACGAGAAGCGCATGCTTCAGGAGTCCGTTGACGCCCTCTTCGACAACGGCCGCCGCGGCCGCCCCGTCGCGGGCCCGGGCAACCGTCCGCTGAAGTCGATCTCGGACATGCTCAAGGGTAAGCAGGGTCGTTTCCGTCAGAACCTGCTCGGTAAGCGCGTCGACTACTCGGGTCGTTCCGTTATCGTCGTCGGCCCGCAGCTGCAGCTGCACCAGTGTGGTCTGCCCAAGCAGATGGCCCTGGAGCTGTTCAAGCCCTTCGTCATGAAGCGCCTGGTTGAGAAGAACTACGCGCAGAATGTCAAGGCCGCCAAGCGCAAGGTTGAGCGTCAGCGCCCCGAGGTGTGGGACGTCCTCGACGACGTCATCCGCGAGCACCCCGTGCTGCTGAACCGTGCACCTACGCTGCACCGCCTCGGCATCCAGGCGTTCGAGCCCCAGCTGATCGAGGGTAAGGCTATCCAGCTGCACCCCCTCGCCTGTGGCGCGTTCAACGCTGACTTCGATGGCGACCAGATGGCTGTCCACCTGCCGCTGGGCGCTGAGGCGCAGGCCGAGGCCCGCATCCTCATGCTGTCGACGAACAACATCCTCAAGCCCTCCGACGGCCGCCCCGTGGCCATGCCGTCGCAGGACATGATCATCGGTCTGTTCCACCTGACCTCGAACCCCGACCCGTCGGTCCCGGTCGAGAAGGACGAAGACGGAAACCCTGTGATTCCGTACTTCTCCAGCCAGGCGGAGGCCCAGATGGCGTTCGACGCCGGCAACCTGGACCTGAACGCGACCGCGCGCATCCGCTTTGCCGACGGCACCGTGCCGCCCGAGGGCTGGGAAGCCCCCGAGGGTTGGGAGCCCGGCGACGATCTGATCCTCGAGACCAGCCTCGGCCGCGCGATCTTCAACGAGCAGCTGCCCACCGACTACCCGTTCGTCAACGAGGTCGTCGGCAAGAAGCAGCTCGGCAACATCGTGAACACGCTGACCCAGCGTTACCCGAACGTGCTCGTGGCGGACTGCCTCGACGCGCTGAAGTCGGCCGGCTTCCACTGGTCGACCTGGTCGGGTATCACGATTGCGTTCTCCGACATTCAGGCCTCGCCGCGTAAGCGCGAGATCCTGGCCCGCTACGAGGCCAAGGCCGCCGAGATCGTCGAGCAGTTCGAGACCGGTATCATCCTCGAGGAAACCCGCTACGAGGAACTCGTCAAGCTGTGGCTGCAGTGCACCGAAGAGGTCGCTGAGGACATGCGCGCGAACTTCACCGAGCGCAACACCGTGTACCGCATGGTGAACTCGGGCGCCCGTGGTAACTGGTCGCAGGTTCAGCAGATCGCCGGTATGCGTGGCCTCGTGTCCGACCCGAAGCAGAAGCTGATCGAGCAGCCCATTAAGGCGAACTACCGCGAGGGCCTGACCGTTCTCGAGTACTTCATCGCCACGCACGGCGCCCGTAAGGGTCTGGTCGATACGGCTCTGCGTACCGCCGAGTCGGGCTACCTGACCCGTCGTCTGGTCGACGTCTCGCAGGACGTCATCGTCCGCGAGGCCGACTGTGGCACCCGCGCCGGCCTGAAGATCGACATCGCTCACAAGAACGAGTTCGGTGAGTGGGAGGCGTCCGAGACCATCGAGACGACCGCCTACGCACGTAACCTCGCCCGTGACGCGGTGAACGAGGCCGGAGAGGTCGTCATGCCCGCAGGCACCGACCTGGGTGATGATCAGCTCGCCGAGCTGGTTGCCGCCGGCGTCGAGCAGATCGTCTGCCGTTCCGTCCTCACCTGTGAGTCGCAGGTCGGCACCTGTGCGGCCTGCTACGGCCGTTCGCTGGCTACCGGCAAGCAGGTCGACATCGGCGAGGCCGTCGGCATTATCGCCGCCCAGTCGATTGGCGAGCCCGGCACGCAGCTGACGATGCGTACGTTCCACACCGGTGGCGCCGCCTCCGCTGCGGATATTACGCAGGGTCTGCCCCGTGTTCAGGAACTCTTCGAGGCCCGTAGCCCGAAGGTCGAGGCGAAGATGAACGAGGCCGCCGGCCGCGTCCACATCGACGACGAAGACCCGAGCGCACGTAAGGTCGTCATCACCCGTGACGATGGCAAGGAAGACCTGGTCATCGAGGTGTCGCGTCGCCAGAAGCTCCTCGTGTCCGAGGGCCAGCACGTCGAGGCCGGAACCCCGCTGACCGAAGGCCAGCTGGATCCCAAGGAGATCCTGCGCATCATGGGCCGCAACGTGGCTCAGAAGATGCTCGTGGACGAGGTCCAGAAGGTGTACCGCGACCAGGGTGTGGGCATCCACGCCAAGCACATCGAGGTCATCGTCCGTCAGATGCTGCGCCGCGTCACCATCCTGGAGCCCGGCGACACGACGTTCATGCCCGGCGAGCTCGTCGACCGCATGGCGTACCTGACGCAGAACCGTCGCGTCGCAGCCGAGGGTGGCCAGCCCGCCTCCGGCCGCCAGATGCTGATGGGTATCACGAAGGCGTCGCTGGCCACGGATTCGTGGCTGTCGGCCGCCTCCTTCCAGGAGACCACCAAGGTCCTGACCGAGGCCGCTATGAACGGCAAGTCGGACTCCCTGGTGGGCCTCAAGGAGAACGTCATTCTCGGTAAGCTCATCCCGGCTGGCACCGGCCTGTCGCGCTACAACGACGTCATCGTTGAGCCGACGGCTGAGGCCATGGCGAACTCGAACTACTCCGAGGCCGACTTCGGTGACGGCTCCGTGTCCGAGGACTTCCTCGACGCGCTGGGCGCCATCGACTTTGGCATGAACTTCCGCGAGTAA
PROTEIN sequence
Length: 1301
LLDAKTFDSLKITLATGDDIAVWSHGEVKKPETINYRTLKPERDGLFGEQIFGPTRDWECACGKYKRVRYKGIICEKCGVEVTRSRVRRERMGHIDLAAPVTHIWYFKGVPSRLGYVLNLAPKDLEKVIYFAAYMITEVDEKGRHEDLAELRAELEVQKKQMENNRDATINDFAEQLESDMAALEKDGASQAERERARKQGEREMAKIRRRFDGDIEGLEAVWERFKDLKVGDLEGDERLYRAMVARYGTYFKGDMGAAAIQKRLETFDLEAEVAALRQTIASDSGPRKARAIKRLKVINAFVATGNSPASMVLTKIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNTRLKRLLELGAPEIIVNNEKRMLQESVDALFDNGRRGRPVAGPGNRPLKSISDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPQLQLHQCGLPKQMALELFKPFVMKRLVEKNYAQNVKAAKRKVERQRPEVWDVLDDVIREHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLACGAFNADFDGDQMAVHLPLGAEAQAEARILMLSTNNILKPSDGRPVAMPSQDMIIGLFHLTSNPDPSVPVEKDEDGNPVIPYFSSQAEAQMAFDAGNLDLNATARIRFADGTVPPEGWEAPEGWEPGDDLILETSLGRAIFNEQLPTDYPFVNEVVGKKQLGNIVNTLTQRYPNVLVADCLDALKSAGFHWSTWSGITIAFSDIQASPRKREILARYEAKAAEIVEQFETGIILEETRYEELVKLWLQCTEEVAEDMRANFTERNTVYRMVNSGARGNWSQVQQIAGMRGLVSDPKQKLIEQPIKANYREGLTVLEYFIATHGARKGLVDTALRTAESGYLTRRLVDVSQDVIVREADCGTRAGLKIDIAHKNEFGEWEASETIETTAYARNLARDAVNEAGEVVMPAGTDLGDDQLAELVAAGVEQIVCRSVLTCESQVGTCAACYGRSLATGKQVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAASAADITQGLPRVQELFEARSPKVEAKMNEAAGRVHIDDEDPSARKVVITRDDGKEDLVIEVSRRQKLLVSEGQHVEAGTPLTEGQLDPKEILRIMGRNVAQKMLVDEVQKVYRDQGVGIHAKHIEVIVRQMLRRVTILEPGDTTFMPGELVDRMAYLTQNRRVAAEGGQPASGRQMLMGITKASLATDSWLSAASFQETTKVLTEAAMNGKSDSLVGLKENVILGKLIPAGTGLSRYNDVIVEPTAEAMANSNYSEADFGDGSVSEDFLDALGAIDFGMNFRE*