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NECEvent2014_2_3_Actinomyces_HPA0247_66_505

NECEvent2014_2_3_Actinomyces_sp__HPA0247_65_476
In projects: NECEvent2014_2_3

Consensus taxonomy: Actinomyces sp. HPA0247  →  Actinomyces  →  Actinomycetales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 151-200 of 258 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_2_3_scaffold_156 172_003_scaffold_156
Species: Actinomyces sp. HPA0247 (80%)
45 49148 bp 64.98 491.45 81.62
NECEvent2014_2_3_scaffold_764 172_003_scaffold_764
Species: Actinomyces sp. HPA0247 (85.71%)
7 5310 bp 63.58 492.68 92.26
NECEvent2014_2_3_scaffold_1564 172_003_scaffold_1564
Species: Actinomyces sp. ICM47 (100%)
1 1833 bp 63.28 492.80 100.00
NECEvent2014_2_3_scaffold_450 172_003_scaffold_450
Species: Actinomyces sp. HPA0247 (81.82%)
11 9058 bp 64.57 493.09 96.28
NECEvent2014_2_3_scaffold_361 172_003_scaffold_361
Species: Actinomyces sp. HPA0247 (72.73%)
11 13272 bp 63.86 493.58 87.48
NECEvent2014_2_3_scaffold_616 172_003_scaffold_616
Species: Actinomyces sp. HPA0247 (75%)
4 5314 bp 66.22 494.20 73.28
NECEvent2014_2_3_scaffold_705 172_003_scaffold_705
Species: Actinomyces sp. HPA0247 (66.67%)
6 5620 bp 67.15 494.23 87.79
NECEvent2014_2_3_scaffold_2315 172_003_scaffold_2315
Species: Actinomyces sp. HPA0247 (100%)
1 1325 bp 69.43 494.83 99.85
NECEvent2014_2_3_scaffold_153 172_003_scaffold_153
Species: Actinomyces sp. HPA0247 (88.24%)
34 37774 bp 64.15 495.09 89.56
NECEvent2014_2_3_scaffold_538 172_003_scaffold_538
Species: Actinomyces sp. HPA0247 (83.33%)
6 7001 bp 64.55 495.16 81.07
NECEvent2014_2_3_scaffold_1965 172_003_scaffold_1965
Species: Actinomyces sp. HPA0247 (50%)
2 1508 bp 64.52 497.25 85.94
NECEvent2014_2_3_scaffold_404 172_003_scaffold_404
Species: Actinomyces sp. HPA0247 (66.67%)
9 13653 bp 65.61 497.88 89.76
NECEvent2014_2_3_scaffold_408 172_003_scaffold_408
Species: Actinomyces sp. HPA0247 (66.67%)
18 17960 bp 64.68 498.60 89.28
NECEvent2014_2_3_scaffold_220 172_003_scaffold_220
Species: Actinomyces sp. HPA0247 (80.49%)
41 46294 bp 65.75 498.66 81.35
NECEvent2014_2_3_scaffold_890 172_003_scaffold_890
Species: Actinomyces sp. HPA0247 (100%)
2 3216 bp 66.23 499.21 91.60
NECEvent2014_2_3_scaffold_1028 172_003_scaffold_1028
Species: Actinomyces sp. HPA0247 (100%)
4 4612 bp 67.58 499.66 92.76
NECEvent2014_2_3_scaffold_494 172_003_scaffold_494
Species: Actinomyces sp. HPA0247 (57.14%)
7 7621 bp 69.79 501.43 82.98
NECEvent2014_2_3_scaffold_281 172_003_scaffold_281
Species: Actinomyces sp. HPA0247 (70%)
20 40115 bp 66.18 502.08 83.53
NECEvent2014_2_3_scaffold_106 172_003_scaffold_106
Species: Actinomyces sp. HPA0247 (68.66%)
67 70806 bp 65.74 502.21 88.55
NECEvent2014_2_3_scaffold_433 172_003_scaffold_433
Species: Actinomyces sp. HPA0247 (88.89%)
9 9827 bp 68.64 502.75 88.23
NECEvent2014_2_3_scaffold_2273 172_003_scaffold_2273
Species: Actinomyces sp. HPA0247 (100%)
4 3293 bp 58.03 503.20 94.47
NECEvent2014_2_3_scaffold_849 172_003_scaffold_849
Genus: Actinomyces (83.33%)
6 7778 bp 62.33 503.59 67.59
NECEvent2014_2_3_scaffold_127 172_003_scaffold_127
Species: Actinomyces sp. HPA0247 (56.1%)
41 41730 bp 65.77 503.59 86.29
NECEvent2014_2_3_scaffold_308 172_003_scaffold_308
Genus: Actinomyces (77.78%)
18 25576 bp 67.83 505.14 81.53
NECEvent2014_2_3_scaffold_949 172_003_scaffold_949
Species: Actinomyces sp. HPA0247 (80%)
10 7401 bp 65.25 505.51 88.04
NECEvent2014_2_3_scaffold_552 172_003_scaffold_552
Species: Actinomyces sp. HPA0247 (100%)
8 8606 bp 66.58 505.60 96.70
NECEvent2014_2_3_scaffold_292 172_003_scaffold_292
Species: Actinomyces sp. HPA0247 (81.48%)
27 24830 bp 64.32 505.95 90.55
NECEvent2014_2_3_scaffold_987 172_003_scaffold_987
Species: Actinomyces sp. HPA0247 (100%)
2 2780 bp 66.37 506.28 93.13
NECEvent2014_2_3_scaffold_372 172_003_scaffold_372
Species: Actinomyces sp. HPA0247 (69.23%)
13 14096 bp 61.94 506.94 79.55
NECEvent2014_2_3_scaffold_99 172_003_scaffold_99
Species: Actinomyces sp. HPA0247 (86.11%)
36 49919 bp 65.66 507.72 85.93
NECEvent2014_2_3_scaffold_758 172_003_scaffold_758
Species: Actinomyces sp. HPA0247 (100%)
4 4775 bp 67.85 508.99 96.19
NECEvent2014_2_3_scaffold_174 172_003_scaffold_174
Species: Actinomyces sp. HPA0247 (89.66%)
29 37886 bp 66.96 509.03 88.69
NECEvent2014_2_3_scaffold_1119 172_003_scaffold_1119
Species: Actinomyces sp. HPA0247 (100%)
3 2462 bp 61.05 510.19 95.65
NECEvent2014_2_3_scaffold_790 172_003_scaffold_790
Species: Actinomyces sp. HPA0247 (80%)
5 5278 bp 69.40 510.39 85.88
NECEvent2014_2_3_scaffold_267 172_003_scaffold_267
Genus: Actinomyces (89.47%)
19 18865 bp 63.68 510.72 78.69
NECEvent2014_2_3_scaffold_1017 172_003_scaffold_1017
Species: Actinomyces sp. HPA0247 (80%)
5 5100 bp 67.55 511.21 89.24
NECEvent2014_2_3_scaffold_3279 172_003_scaffold_3279
Species: Actinomyces sp. HPA0247 (100%)
1 1029 bp 67.44 511.95 100.00
NECEvent2014_2_3_scaffold_439 172_003_scaffold_439
Species: Actinomyces sp. HPA0247 (69.57%)
23 13822 bp 61.08 512.04 87.14
NECEvent2014_2_3_scaffold_556 172_003_scaffold_556
Species: Actinomyces sp. HPA0247 (100%)
7 6975 bp 67.08 512.49 80.77
NECEvent2014_2_3_scaffold_354 172_003_scaffold_354
Species: Actinomyces sp. HPA0247 (80.95%)
21 21981 bp 68.03 512.74 85.93
NECEvent2014_2_3_scaffold_2784 172_003_scaffold_2784
Species: Actinomyces odontolyticus (50%)
2 1583 bp 60.71 512.92 71.45
NECEvent2014_2_3_scaffold_766 172_003_scaffold_766
Species: Actinomyces sp. HPA0247 (80%)
5 5453 bp 67.23 512.99 83.46
NECEvent2014_2_3_scaffold_1514 172_003_scaffold_1514
Species: Actinomyces sp. HPA0247 (66.67%)
3 2310 bp 63.98 514.29 92.86
NECEvent2014_2_3_scaffold_362 172_003_scaffold_362
Species: Actinomyces sp. HPA0247 (94.74%)
19 24324 bp 67.18 515.31 91.39
NECEvent2014_2_3_scaffold_994 172_003_scaffold_994
Species: Actinomyces sp. HPA0247 (66.67%)
3 2752 bp 65.99 515.63 98.00
NECEvent2014_2_3_scaffold_280 172_003_scaffold_280
Species: Actinomyces sp. HPA0247 (78.57%)
42 49904 bp 66.29 517.09 85.89
NECEvent2014_2_3_scaffold_1190 172_003_scaffold_1190
Species: Actinomyces sp. HPA0247 (100%)
1 2323 bp 70.30 517.15 99.96
NECEvent2014_2_3_scaffold_298 172_003_scaffold_298
Species: Actinomyces sp. HPA0247 (93.75%)
16 23019 bp 65.67 517.32 90.90
NECEvent2014_2_3_scaffold_180 172_003_scaffold_180
Species: Actinomyces sp. HPA0247 (89.47%)
38 34348 bp 66.25 517.97 80.94
NECEvent2014_2_3_scaffold_2359 172_003_scaffold_2359
Species: Actinomyces sp. HPA0247 (100%)
2 2574 bp 65.03 519.17 73.54
Displaying items 151-200 of 258 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.