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NECEvent2014_2_3_Actinomyces_HPA0247_66_505

NECEvent2014_2_3_Actinomyces_sp__HPA0247_65_476
In projects: NECEvent2014_2_3

Consensus taxonomy: Actinomyces sp. HPA0247  →  Actinomyces  →  Actinomycetales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 51-100 of 258 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_2_3_scaffold_848 172_003_scaffold_848
Species: Actinomyces sp. HPA0247 (50%)
2 3471 bp 62.92 75.84 90.15
NECEvent2014_2_3_scaffold_1518 172_003_scaffold_1518
Species: Actinomyces sp. HPA0247 (100%)
2 1878 bp 68.96 79.79 96.49
NECEvent2014_2_3_scaffold_1917 172_003_scaffold_1917
Species: Actinomyces sp. HPA0247 (50%)
2 1530 bp 66.08 80.10 100.00
NECEvent2014_2_3_scaffold_1423 172_003_scaffold_1423
Species: Actinomyces sp. HPA0247 (100%)
1 2005 bp 65.64 81.85 80.35
NECEvent2014_2_3_scaffold_1309 172_003_scaffold_1309
Genus: Actinomyces (100%)
3 2759 bp 69.95 82.91 91.66
NECEvent2014_2_3_scaffold_985 172_003_scaffold_985
Genus: Actinomyces (100%)
3 2788 bp 68.51 83.72 94.58
NECEvent2014_2_3_scaffold_1172 172_003_scaffold_1172
Species: Actinomyces odontolyticus (50%)
2 2364 bp 71.32 83.95 100.25
NECEvent2014_2_3_scaffold_1567 172_003_scaffold_1567
Species: Actinomyces sp. HPA0247 (100%)
2 1829 bp 66.87 85.46 85.46
NECEvent2014_2_3_scaffold_2608 172_003_scaffold_2608
Species: Actinomyces sp. HPA0247 (100%)
2 1211 bp 70.36 87.20 94.63
NECEvent2014_2_3_scaffold_1427 172_003_scaffold_1427
Species: Actinomyces sp. ICM54 (100%)
2 2002 bp 65.78 88.79 70.43
NECEvent2014_2_3_scaffold_2399 172_003_scaffold_2399
Species: Actinomyces sp. HPA0247 (100%)
2 1290 bp 65.81 93.37 87.44
NECEvent2014_2_3_scaffold_3027 172_003_scaffold_3027
Species: Actinomyces sp. ICM54 (50%)
2 1090 bp 66.79 95.23 100.18
NECEvent2014_2_3_scaffold_2831 172_003_scaffold_2831
Species: Actinomyces sp. HPA0247 (100%)
1 1139 bp 63.74 97.85 69.80
NECEvent2014_2_3_scaffold_2098 172_003_scaffold_2098
Species: Actinomyces sp. HPA0247 (100%)
3 1431 bp 65.83 98.53 93.71
NECEvent2014_2_3_scaffold_2243 172_003_scaffold_2243
Genus: Actinomyces (66.67%)
3 1358 bp 65.54 99.30 86.38
NECEvent2014_2_3_scaffold_2376 172_003_scaffold_2376
Species: Actinomyces sp. ICM39 (50%)
2 1302 bp 70.89 99.77 93.78
NECEvent2014_2_3_scaffold_1757 172_003_scaffold_1757
Species: Actinomyces sp. HPA0247 (100%)
1 1667 bp 67.73 101.41 99.88
NECEvent2014_2_3_scaffold_3135 172_003_scaffold_3135
Species: Actinomyces sp. ICM39 (50%)
2 1065 bp 70.99 106.62 100.28
NECEvent2014_2_3_scaffold_2856 172_003_scaffold_2856
Species: Actinomyces sp. HPA0247 (100%)
2 1134 bp 66.58 106.75 100.27
NECEvent2014_2_3_scaffold_1869 172_003_scaffold_1869
Species: Actinomyces sp. HPA0247 (100%)
2 1569 bp 70.62 112.24 89.10
NECEvent2014_2_3_scaffold_3247 172_003_scaffold_3247
Species: Actinomyces sp. HPA0247 (100%)
2 1037 bp 70.30 120.64 91.13
NECEvent2014_2_3_scaffold_2932 172_003_scaffold_2932
Species: Actinomyces sp. HPA0247 (100%)
2 1114 bp 67.95 124.69 95.60
NECEvent2014_2_3_scaffold_2713 172_003_scaffold_2713
Species: Actinomyces sp. HPA0247 (100%)
1 1179 bp 64.55 124.81 70.99
NECEvent2014_2_3_scaffold_3242 172_003_scaffold_3242
Species: Actinomyces sp. HPA0247 (100%)
1 1037 bp 64.90 130.18 77.82
NECEvent2014_2_3_scaffold_2926 172_003_scaffold_2926
Species: Actinomyces sp. HPA0247 (50%)
2 1116 bp 69.89 132.12 93.55
NECEvent2014_2_3_scaffold_1763 172_003_scaffold_1763
Species: Atopobium sp. ICM58 (100%)
1 1663 bp 72.10 139.27 99.94
NECEvent2014_2_3_scaffold_3332 172_003_scaffold_3332
Species: Actinomyces sp. HPA0247 (66.67%)
3 1015 bp 63.45 139.36 90.15
NECEvent2014_2_3_scaffold_2961 172_003_scaffold_2961
Species: Actinomyces sp. HPA0247 (100%)
2 1108 bp 70.40 142.15 100.18
NECEvent2014_2_3_scaffold_1634 172_003_scaffold_1634
Species: Actinomyces sp. ICM47 (50%)
2 1772 bp 67.10 143.91 95.65
NECEvent2014_2_3_scaffold_3240 172_003_scaffold_3240
Species: Actinomyces sp. HPA0247 (100%)
1 1037 bp 64.03 147.25 99.81
NECEvent2014_2_3_scaffold_2374 172_003_scaffold_2374
Species: Actinomyces sp. HPA0247 (100%)
1 1303 bp 66.31 148.16 99.92
NECEvent2014_2_3_scaffold_2757 172_003_scaffold_2757
Species: Actinomyces sp. HPA0247 (100%)
2 1164 bp 68.90 157.73 99.48
NECEvent2014_2_3_scaffold_3142 172_003_scaffold_3142
Species: Actinomyces sp. HPA0247 (100%)
1 1063 bp 65.29 166.23 99.91
NECEvent2014_2_3_scaffold_3348 172_003_scaffold_3348
Species: Actinomyces sp. HPA0247 (100%)
1 1012 bp 66.50 174.31 99.90
NECEvent2014_2_3_scaffold_666 172_003_scaffold_666
Genus: Actinomyces (85.71%)
7 5356 bp 66.90 343.47 91.97
NECEvent2014_2_3_scaffold_1585 172_003_scaffold_1585
Species: Actinomyces sp. HPA0247 (100%)
2 1814 bp 67.03 388.64 100.22
NECEvent2014_2_3_scaffold_2036 172_003_scaffold_2036
Species: Actinomyces sp. oral taxon 172 (50%)
2 1464 bp 65.92 401.74 92.01
NECEvent2014_2_3_scaffold_1554 172_003_scaffold_1554
Species: Actinomyces sp. HPA0247 (100%)
1 1840 bp 72.88 417.96 99.95
NECEvent2014_2_3_scaffold_487 172_003_scaffold_487
Species: Actinomyces sp. HPA0247 (85.71%)
7 7895 bp 66.12 430.72 96.17
NECEvent2014_2_3_scaffold_1211 172_003_scaffold_1211
Species: Actinomyces sp. HPA0247 (66.67%)
3 3355 bp 66.11 441.77 87.90
NECEvent2014_2_3_scaffold_2948 172_003_scaffold_2948
Species: Actinomyces sp. HPA0247 (100%)
1 1111 bp 62.29 442.30 92.89
NECEvent2014_2_3_scaffold_1816 172_003_scaffold_1816
Species: Actinomyces sp. HPA0247 (100%)
1 1617 bp 60.98 445.18 99.81
NECEvent2014_2_3_scaffold_1246 172_003_scaffold_1246
Species: Actinomyces sp. HPA0247 (100%)
4 3449 bp 64.34 450.57 96.98
NECEvent2014_2_3_scaffold_1428 172_003_scaffold_1428
Species: Actinomyces sp. HPA0247 (66.67%)
3 3086 bp 70.64 455.35 91.19
NECEvent2014_2_3_scaffold_1979 172_003_scaffold_1979
Genus: Actinomyces (100%)
3 1499 bp 67.51 455.70 81.45
NECEvent2014_2_3_scaffold_1559 172_003_scaffold_1559
Species: Actinomyces sp. HPA0247 (66.67%)
3 2439 bp 72.41 457.38 101.11
NECEvent2014_2_3_scaffold_683 172_003_scaffold_683
Species: Actinomyces sp. HPA0247 (85.71%)
7 5693 bp 66.75 458.56 89.06
NECEvent2014_2_3_scaffold_2265 172_003_scaffold_2265
Species: Actinomyces sp. HPA0247 (66.67%)
3 1350 bp 67.41 462.00 90.89
NECEvent2014_2_3_scaffold_625 172_003_scaffold_625
Species: Actinomyces sp. HPA0247 (64.71%)
17 17201 bp 65.82 462.57 84.75
NECEvent2014_2_3_scaffold_85 172_003_scaffold_85
Species: Actinomyces sp. HPA0247 (79.71%)
138 150282 bp 64.85 463.14 92.00
Displaying items 51-100 of 258 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.