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NECEvent2014_2_3_scaffold_54_28

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 29705..30790

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system (T2SS), F family protein n=44 Tax=Clostridium difficile RepID=T2T8B7_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 361.0
  • Bit_score: 688
  • Evalue 2.80e-195
  • rbh
type IV pilus-assembly protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 361.0
  • Bit_score: 688
  • Evalue 7.90e-196
Putative type IV pilus-assembly protein {ECO:0000313|EMBL:CBE07020.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 361.0
  • Bit_score: 688
  • Evalue 3.90e-195

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1086
ATGAGATTATCTAAAAATATATTTTATAATTTAGAAAAGTTTTATTTAGTATTAAATAGAATCAGTGATAAAGAAATTAGAGTAATTTGCAAAGAGATAGGCATATTGCTGGAATCTGGATGTGAAATTACAAAAATATTTGAAATCATTGAGAGTCAGTCAAGTAAAAAAGTAAAGAATTTGCTTAGTATAGTATCAAATCATATTCAAAAAGGTAACTCAATAGCAGAATCATTTCAAATAACAGGTATATTTTCTAAATTCTTTATAAGTATGATAAAAGCAGGAGAAACTAGTGGAAACTTAGATATAATAATGAGTGATTTATCTAATTATTATGATAAAGAATACAAATTAAAAATGAAAATAATAACTATTTCAATATATCCAATAATACTTATAATATTATCTATCTTATCAATGTTGTTTATATTCGTATTTGTAATACCTAATTTTCAGGTGGTTTTTACCAACAATGGAATTGAACCACCTTTAATAACTAGAGTTTTAATGGGAATATCTACAGTGGTTACAAATAACTTAGCTTATATAATATTTAGTTTTATATTGTTTTCAATAGGAAGCATTTATTTCTTTATAACAAATGATAATATAAAAAAATTGATTAATTCGTTAAAATTCAAAATACCTTTTATAAAAAAAATTAATCAGTTAGTAGCTACAACAAGATTTTCAAGGGCATTGTCCGTTTTAATTAGCAGTGGAATACAAATTGTGGAAGCTATAGACATGTCAGCTAGTGTTATAGACAACGAATTTATTTATGAAAGGTTAAAGATTTCCAATAATTATATAAAAAAAGGAAATAGCATAGGTAAATCTTTGAATTTAGCAAATGTTTTTCCAAAATTATTTATTTCAATGGCAAATACAGGAGAAGAAAGTGGGAAACTAGATAAAAGTCTAAATGTAATAAATAAATTTTATGAAAATGAATTAAATAACAAAATAGAGCAAATAATGAAATTTATAGAACCTATGCTAATTGTATTTATGGGATTAATTATTGGTACTTTTATTTTAGCAATGGTTGTTCCTATGTTTGATGCAATTACTAATTTTTAG
PROTEIN sequence
Length: 362
MRLSKNIFYNLEKFYLVLNRISDKEIRVICKEIGILLESGCEITKIFEIIESQSSKKVKNLLSIVSNHIQKGNSIAESFQITGIFSKFFISMIKAGETSGNLDIIMSDLSNYYDKEYKLKMKIITISIYPIILIILSILSMLFIFVFVIPNFQVVFTNNGIEPPLITRVLMGISTVVTNNLAYIIFSFILFSIGSIYFFITNDNIKKLINSLKFKIPFIKKINQLVATTRFSRALSVLISSGIQIVEAIDMSASVIDNEFIYERLKISNNYIKKGNSIGKSLNLANVFPKLFISMANTGEESGKLDKSLNVINKFYENELNNKIEQIMKFIEPMLIVFMGLIIGTFILAMVVPMFDAITNF*