ggKbase home page

NECEvent2014_2_3_scaffold_54_29

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 30844..31203

Top 3 Functional Annotations

Value Algorithm Source
Putative type IV pilin n=58 Tax=Clostridium difficile RepID=C9XRP4_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 119.0
  • Bit_score: 228
  • Evalue 4.50e-57
type IV pilin similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 119.0
  • Bit_score: 227
  • Evalue 2.80e-57
Putative type IV pilin {ECO:0000313|EMBL:CDS85101.1}; Putative type IV pilin PilA {ECO:0000313|EMBL:CEJ99947.1}; Type IV pilin {ECO:0000313|EMBL:CKG77798.1}; TaxID=1496 species="Bacteria; Firmicutes; similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 119.0
  • Bit_score: 227
  • Evalue 1.40e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 360
TTGATAAATTTGATAAATAAAAAACGAAAAGGATTTACACTTGTTGAAATGATTGTAGTAGTAACTATTTTAGGCGTTATATCTAGTATAGCATTAGTTAAGTATAGTAAGGTTCAAGAAAGTGCCAAATTAAATGCAGACTATACGAATGCTGCTAATATAGTAACCGCAGCTAGCATGGCAATTAATGATGATGAAAAGACAATAGACTCTCTAAGTGTAGAGACATTGAAGGAAAAGGGATACCTAAATACTGTTCCAGTTCCTCAGAGTACATCAGGTAAATTCGAACTTGTCATAAATGATAGCGGAACAGATATAAGCGTAAATATAAATTCTAAGCAATTTTATCCAAAATAA
PROTEIN sequence
Length: 120
LINLINKKRKGFTLVEMIVVVTILGVISSIALVKYSKVQESAKLNADYTNAANIVTAASMAINDDEKTIDSLSVETLKEKGYLNTVPVPQSTSGKFELVINDSGTDISVNINSKQFYPK*