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NECEvent2014_2_3_scaffold_411_12

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(9734..10072)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix family protein n=1 Tax=Clostridium difficile CD69 RepID=T3A1Q6_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 112.0
  • Bit_score: 217
  • Evalue 9.70e-54
Transcriptional regulator, HTH-type {ECO:0000313|EMBL:CCL22523.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclost similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 112.0
  • Bit_score: 217
  • Evalue 8.00e-54
regulatory protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 105.0
  • Bit_score: 207
  • Evalue 2.80e-51

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 339
GTGAGGGAAATAGTAACAATAATGAATTATATAGGTAAAAGACTTAAAGAAGAACGGAAAAAAGCAAATTTAACTTCAAAAGAATTTGCAAATATGGTTGGAGTATCGCCTTGGTATATAACTCAAATCGAAAGTGGTAAAAAGAATCCAAGTCTTAAAACATTCATAAAATTTGTAAATATATTAAATATTTCTGCAGATGTTCTTATAAAAGATATTACTTCCACTGGAAAAACATATTTAGAAAATGATATAAATGAAGAGTTAAAAGACTTAAATTCAAGAGAACTAAATCTGATATCACAGATTATAGACATCATAAAAAAGAATAAAATATAA
PROTEIN sequence
Length: 113
VREIVTIMNYIGKRLKEERKKANLTSKEFANMVGVSPWYITQIESGKKNPSLKTFIKFVNILNISADVLIKDITSTGKTYLENDINEELKDLNSRELNLISQIIDIIKKNKI*