ggKbase home page

NECEvent2014_2_3_scaffold_411_13

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(10073..10411)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix family protein n=219 Tax=Clostridium difficile RepID=C9XL16_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 112.0
  • Bit_score: 220
  • Evalue 6.80e-55
regulatory protein similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 112.0
  • Bit_score: 219
  • Evalue 4.20e-55
Transcriptional regulator, HTH-type {ECO:0000313|EMBL:CCK98632.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclost similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 112.0
  • Bit_score: 219
  • Evalue 2.10e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 339
TTGGCAAATATAGGAAAAATAATAGGAGATAGAATAAAAGTCTATAGAACAAAATTGGGATATAGTCAAGAGTTTCTAGCAGAAAAGGCAGGTTTACATCCAACATATATTGGTCAGATTGAAAGAGCTGAGACAAATACATCTATCAATATTATAATGAAAATTGCTACTGCTTTAGACATACCACTTGAATTGTTATTTGCAAATATTATTACAACAGAAGGCGTTGATAACTCTGTACCTTTAGAATGTTATGAAATGATTAATAAATTAACTGAAAAAGAACAAATTGCAATGCTAGAGTTAATAAAGTGCATCATTAAATACAAAGAAATATAA
PROTEIN sequence
Length: 113
LANIGKIIGDRIKVYRTKLGYSQEFLAEKAGLHPTYIGQIERAETNTSINIIMKIATALDIPLELLFANIITTEGVDNSVPLECYEMINKLTEKEQIAMLELIKCIIKYKEI*