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NECEvent2014_2_3_scaffold_165

Alias: 172_003_scaffold_165

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_165_1
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..412
DNA (411bp) protein (137aa)
Transposase-like protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KWP1_9FIRM
Transposase-like protein {ECO:0000313|EMBL:EFR33751.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-
transposase IS200-family protein
NECEvent2014_2_3_scaffold_165_2
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

547..1272
DNA (726bp) protein (242aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoni
uppS; Isoprenyl transferase (EC:2.5.1.-)
Isoprenyl transferase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYH6_9FIRM rbh
NECEvent2014_2_3_scaffold_165_3
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1275..2057
DNA (783bp) protein (261aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilacea
Phosphatidate cytidylyltransferase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYH7_9FIRM rbh
phosphatidate cytidylyltransferase
NECEvent2014_2_3_scaffold_165_4
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2067..3080
DNA (1014bp) protein (338aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphil
RIP metalloprotease RseP n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYH8_9FIRM rbh
RIP metalloprotease RseP
NECEvent2014_2_3_scaffold_165_5
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3074..4132
DNA (1059bp) protein (353aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS0
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYH9_9FIRM rbh
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
NECEvent2014_2_3_scaffold_165_6
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4122..8423
DNA (4302bp) protein (1434aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=908338 species="Bacteria; Firmicut
polC; DNA polymerase III PolC-type (EC:2.7.7.7)
DNA polymerase III subunit alpha n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI000302A168 rbh
NECEvent2014_2_3_scaffold_165_7
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8488..8949
DNA (462bp) protein (154aa)
Ribosome maturation factor RimP n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYI2_9FIRM rbh
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus
hypothetical protein
NECEvent2014_2_3_scaffold_165_8
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8961..10196
DNA (1236bp) protein (412aa)
Transcription termination factor NusA n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYI3_9FIRM rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" sour
nusA; Transcription elongation protein NusA
NECEvent2014_2_3_scaffold_165_9
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10222..10485
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYI4_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33143.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei AC
hypothetical protein
NECEvent2014_2_3_scaffold_165_10
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10510..12759
DNA (2250bp) protein (750aa)
Translation initiation factor IF-2 n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYI5_9FIRM rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphi
infB; Translation initiation factor IF-2
NECEvent2014_2_3_scaffold_165_11
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12759..13112
DNA (354bp) protein (118aa)
Ribosome-binding factor A n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYI6_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" so
hypothetical protein
NECEvent2014_2_3_scaffold_165_12
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13105..14094
DNA (990bp) protein (330aa)
DHHA1 domain protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYI7_9FIRM rbh
DHHA1 domain protein {ECO:0000313|EMBL:EFR33129.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2
DHH family/DHHA1 domain protein
NECEvent2014_2_3_scaffold_165_13
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14079..14972
DNA (894bp) protein (298aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043051}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043054};; tRNA pseudouridine(55) s
tRNA pseudouridine synthase B n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYI8_9FIRM rbh
tRNA pseudouridine synthase B
NECEvent2014_2_3_scaffold_165_14
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14963..15883
DNA (921bp) protein (307aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=908338 species="Bacteria; Firmicutes;
Riboflavin biosynthesis protein RibF n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYI9_9FIRM rbh
riboflavin biosynthesis protein RibF
NECEvent2014_2_3_scaffold_165_15
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


15986..16252
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYJ0_9FIRM
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" so
hypothetical protein
NECEvent2014_2_3_scaffold_165_16
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16296..18407
DNA (2112bp) protein (704aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=908338
pnp4; Polyribonucleotide nucleotidyltransferase 4 (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYJ1_9FIRM rbh
NECEvent2014_2_3_scaffold_165_17
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18465..18896
DNA (432bp) protein (144aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYJ2_9FIRM
deoxyuridine 5'-triphosphate nucleotidohydrolase
NECEvent2014_2_3_scaffold_165_18
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18935..21295
DNA (2361bp) protein (787aa)
Stage III sporulation protein E n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYJ3_9FIRM rbh
Stage III sporulation protein E {ECO:0000313|EMBL:EFR33105.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS
ftsK; DNA translocase FtsK
NECEvent2014_2_3_scaffold_165_19
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21288..22622
DNA (1335bp) protein (445aa)
rimO; Ribosomal protein S12 methylthiotransferase RimO (EC:2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYJ4_9FIRM rbh
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase
NECEvent2014_2_3_scaffold_165_20
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22601..23134
DNA (534bp) protein (178aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EFR33056.1}; EC=2.7.8.5 {ECO:0000313|EMBL:EFR33056.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clo
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYJ5_9FIRM rbh
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase
NECEvent2014_2_3_scaffold_165_21
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23143..24378
DNA (1236bp) protein (412aa)
Putative competence-damage inducible protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYJ6_9FIRM rbh
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Pepton
competence damage-inducible protein A
NECEvent2014_2_3_scaffold_165_22
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


24381..25442
DNA (1062bp) protein (354aa)
Protein RecA n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYJ7_9FIRM rbh
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=908338 species="Bacteria; Firmicute
recA; Protein RecA
NECEvent2014_2_3_scaffold_165_23
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25454..26443
DNA (990bp) protein (330aa)
Ser/Thr phosphatase family protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYJ8_9FIRM rbh
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EFR33070.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei
Ser/Thr protein phosphatase family protein
NECEvent2014_2_3_scaffold_165_24
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26431..27882
DNA (1452bp) protein (484aa)
RecF/RecN/SMC N-terminal domain protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYJ9_9FIRM rbh
RecF/RecN/SMC N-terminal domain protein {ECO:0000313|EMBL:EFR33122.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus h
putative exonuclease SBCC
NECEvent2014_2_3_scaffold_165_25
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27883..28131
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYK0_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33118.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei AC
hypothetical protein
NECEvent2014_2_3_scaffold_165_26
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28121..28771
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYK1_9FIRM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33062.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei AC
hypothetical protein
NECEvent2014_2_3_scaffold_165_27
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28874..29191
DNA (318bp) protein (106aa)
TrpR family protein YerC/YecD n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYK2_9FIRM
TrpR family protein YerC/YecD {ECO:0000313|EMBL:EFR33108.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-1
TrpR-like protein YerC/YecD
NECEvent2014_2_3_scaffold_165_28
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29210..30931)
DNA (1722bp) protein (574aa)
Putative fibronectin-binding protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYK3_9FIRM rbh
Putative fibronectin-binding protein {ECO:0000313|EMBL:EFR33099.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus hare
fibronectin-binding protein
NECEvent2014_2_3_scaffold_165_29
unknown

Not on your lists

comp(31190..31315)
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying 29 items

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