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NECEvent2014_3_2_Clostridium_butyricum_31_11

NECEvent2014_3_2_Clostridium_31_11
In projects: NECEvent2014_3_2

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 101-150 of 1098 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_3_2_scaffold_2265 173_006_scaffold_2265
Species: Clostridium butyricum (100%)
1 1105 bp 29.50 5.16 89.86
NECEvent2014_3_2_scaffold_1588 173_006_scaffold_1588
Species: Clostridium sp. IBUN125C (100%)
1 1452 bp 30.03 5.17 46.69
NECEvent2014_3_2_scaffold_1509 173_006_scaffold_1509
Species: Clostridium sp. IBUN125C (100%)
1 1503 bp 28.61 5.19 96.01
NECEvent2014_3_2_scaffold_1995 173_006_scaffold_1995
Species: Clostridium butyricum (100%)
2 1211 bp 29.48 5.20 90.92
NECEvent2014_3_2_scaffold_2299 173_006_scaffold_2299
Species: Clostridium butyricum (100%)
1 1095 bp 28.31 5.21 99.73
NECEvent2014_3_2_scaffold_2215 173_006_scaffold_2215
Species: Clostridium sp. IBUN125C (100%)
1 1121 bp 27.03 5.22 76.27
NECEvent2014_3_2_scaffold_1213 173_006_scaffold_1213
Species: Clostridium butyricum (66.67%)
3 1754 bp 29.53 5.22 99.37
NECEvent2014_3_2_scaffold_1528 173_006_scaffold_1528
Species: Clostridium butyricum (100%)
2 1488 bp 29.03 5.24 87.90
NECEvent2014_3_2_scaffold_1895 173_006_scaffold_1895
Species: Clostridium butyricum (100%)
1 1255 bp 29.48 5.26 99.68
NECEvent2014_3_2_scaffold_821 173_006_scaffold_821
Species: Clostridium butyricum (60%)
5 2253 bp 27.74 5.26 90.15
NECEvent2014_3_2_scaffold_2342 173_006_scaffold_2342
Species: Clostridium sp. IBUN13A (50%)
2 1084 bp 31.00 5.26 99.63
NECEvent2014_3_2_scaffold_1397 173_006_scaffold_1397
Species: Clostridium sp. IBUN125C (100%)
1 1590 bp 30.38 5.28 99.81
NECEvent2014_3_2_scaffold_2373 173_006_scaffold_2373
Species: Clostridium butyricum (100%)
1 1075 bp 27.63 5.30 87.63
NECEvent2014_3_2_scaffold_1984 173_006_scaffold_1984
Species: Clostridium butyricum (50%)
2 1218 bp 27.34 5.30 79.06
NECEvent2014_3_2_scaffold_2504 173_006_scaffold_2504
Species: Clostridium butyricum (100%)
1 1017 bp 28.52 5.31 100.00
NECEvent2014_3_2_scaffold_1419 173_006_scaffold_1419
Species: Clostridium sp. IBUN125C (100%)
2 1578 bp 27.19 5.32 100.38
NECEvent2014_3_2_scaffold_1440 173_006_scaffold_1440
Species: Clostridium butyricum (100%)
2 1550 bp 28.39 5.32 81.10
NECEvent2014_3_2_scaffold_1826 173_006_scaffold_1826
Species: Clostridium sp. IBUN125C (100%)
1 1294 bp 28.52 5.33 80.91
NECEvent2014_3_2_scaffold_2222 173_006_scaffold_2222
Species: Clostridium butyricum (50%)
2 1120 bp 27.05 5.36 96.16
NECEvent2014_3_2_scaffold_2232 173_006_scaffold_2232
Species: Clostridium sp. IBUN13A (66.67%)
3 1116 bp 28.23 5.38 84.41
NECEvent2014_3_2_scaffold_2237 173_006_scaffold_2237
Species: Clostridium butyricum (100%)
2 1116 bp 26.79 5.38 83.87
NECEvent2014_3_2_scaffold_1076 173_006_scaffold_1076
Species: Clostridium butyricum (100%)
2 1894 bp 29.09 5.39 97.25
NECEvent2014_3_2_scaffold_2559 173_006_scaffold_2559
Species: Clostridium sp. IBUN13A (100%)
2 1002 bp 29.74 5.39 97.01
NECEvent2014_3_2_scaffold_2170 173_006_scaffold_2170
Species: Clostridium sp. IBUN13A (50%)
2 1138 bp 28.56 5.40 81.20
NECEvent2014_3_2_scaffold_1190 173_006_scaffold_1190
Species: Clostridium sp. IBUN125C (75%)
4 1779 bp 28.72 5.40 76.90
NECEvent2014_3_2_scaffold_2107 173_006_scaffold_2107
Species: Clostridium sp. IBUN125C (100%)
2 1163 bp 28.03 5.42 89.25
NECEvent2014_3_2_scaffold_2363 173_006_scaffold_2363
Species: Clostridium butyricum (100%)
2 1077 bp 28.04 5.43 63.79
NECEvent2014_3_2_scaffold_2273 173_006_scaffold_2273
Species: Clostridium butyricum (50%)
2 1101 bp 30.97 5.45 90.46
NECEvent2014_3_2_scaffold_822 173_006_scaffold_822
Species: Clostridium sp. IBUN125C (100%)
2 2252 bp 29.44 5.46 98.58
NECEvent2014_3_2_scaffold_2136 173_006_scaffold_2136
Species: Clostridium sp. IBUN125C (100%)
1 1152 bp 31.25 5.47 88.28
NECEvent2014_3_2_scaffold_2012 173_006_scaffold_2012
Species: Clostridium butyricum (100%)
1 1204 bp 27.33 5.48 75.00
NECEvent2014_3_2_scaffold_1717 173_006_scaffold_1717
Species: Clostridium butyricum (100%)
1 1366 bp 30.09 5.49 99.71
NECEvent2014_3_2_scaffold_2456 173_006_scaffold_2456
Species: Clostridium sp. IBUN125C (100%)
1 1037 bp 29.03 5.50 99.81
NECEvent2014_3_2_scaffold_2018 173_006_scaffold_2018
Species: Clostridium butyricum (100%)
1 1201 bp 29.81 5.50 96.92
NECEvent2014_3_2_scaffold_587 173_006_scaffold_587
Species: Clostridium butyricum (75%)
4 2777 bp 28.02 5.51 83.40
NECEvent2014_3_2_scaffold_875 173_006_scaffold_875
Species: Clostridium butyricum (100%)
2 2177 bp 28.30 5.51 89.99
NECEvent2014_3_2_scaffold_1273 173_006_scaffold_1273
Genus: Clostridium (100%)
3 1686 bp 28.35 5.52 84.16
NECEvent2014_3_2_scaffold_1024 173_006_scaffold_1024
Species: Clostridium butyricum (100%)
1 1953 bp 27.96 5.53 93.86
NECEvent2014_3_2_scaffold_2355 173_006_scaffold_2355
Species: Clostridium butyricum (50%)
2 1079 bp 30.12 5.56 89.81
NECEvent2014_3_2_scaffold_1138 173_006_scaffold_1138
Species: Clostridium sp. IBUN13A (50%)
2 1836 bp 28.59 5.56 89.87
NECEvent2014_3_2_scaffold_888 173_006_scaffold_888
Species: Clostridium butyricum (66.67%)
3 2156 bp 29.45 5.57 87.94
NECEvent2014_3_2_scaffold_2055 173_006_scaffold_2055
Species: Clostridium sp. IBUN13A (100%)
1 1184 bp 28.29 5.57 86.15
NECEvent2014_3_2_scaffold_2369 173_006_scaffold_2369
Species: Clostridium butyricum (50%)
2 1076 bp 28.35 5.58 100.65
NECEvent2014_3_2_scaffold_1944 173_006_scaffold_1944
Species: Clostridium butyricum (50%)
2 1234 bp 28.28 5.59 89.95
NECEvent2014_3_2_scaffold_2509 173_006_scaffold_2509
Species: Clostridium butyricum (100%)
1 1016 bp 29.43 5.61 94.19
NECEvent2014_3_2_scaffold_1253 173_006_scaffold_1253
Species: Clostridium sp. IBUN125C (50%)
2 1711 bp 28.52 5.61 92.75
NECEvent2014_3_2_scaffold_1386 173_006_scaffold_1386
Species: Clostridium butyricum (66.67%)
3 1602 bp 28.96 5.62 88.95
NECEvent2014_3_2_scaffold_2518 173_006_scaffold_2518
Species: Clostridium butyricum (100%)
1 1013 bp 31.29 5.63 99.80
NECEvent2014_3_2_scaffold_457 173_006_scaffold_457
Species: Clostridium sp. IBUN13A (87.5%)
8 3192 bp 27.44 5.64 93.99
NECEvent2014_3_2_scaffold_2543 173_006_scaffold_2543
Species: Clostridium butyricum (100%)
1 1008 bp 29.76 5.65 97.32
Displaying items 101-150 of 1098 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.