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NECEvent2014_3_2_Clostridium_butyricum_31_11

NECEvent2014_3_2_Clostridium_31_11
In projects: NECEvent2014_3_2

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 151-200 of 1098 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_3_2_scaffold_1125 173_006_scaffold_1125
Species: Clostridium sp. IBUN125C (50%)
2 1855 bp 28.52 5.66 91.54
NECEvent2014_3_2_scaffold_2243 173_006_scaffold_2243
Species: Clostridium sp. IBUN125C (50%)
2 1113 bp 30.01 5.66 90.03
NECEvent2014_3_2_scaffold_1339 173_006_scaffold_1339
Species: Clostridium butyricum (66.67%)
3 1637 bp 27.73 5.68 81.37
NECEvent2014_3_2_scaffold_2408 173_006_scaffold_2408
Species: Clostridium sp. IBUN125C (50%)
2 1056 bp 28.98 5.68 88.64
NECEvent2014_3_2_scaffold_1667 173_006_scaffold_1667
Species: Clostridium sp. IBUN125C (100%)
1 1397 bp 30.14 5.69 98.57
NECEvent2014_3_2_scaffold_1788 173_006_scaffold_1788
Species: Clostridium sp. IBUN125C (100%)
2 1317 bp 29.84 5.69 98.18
NECEvent2014_3_2_scaffold_918 173_006_scaffold_918
Species: Clostridium butyricum (100%)
4 2104 bp 28.52 5.70 97.39
NECEvent2014_3_2_scaffold_1420 173_006_scaffold_1420
Species: Clostridium sp. IBUN125C (50%)
2 1578 bp 32.83 5.70 67.30
NECEvent2014_3_2_scaffold_1081 173_006_scaffold_1081
Species: Clostridium sp. IBUN125C (50%)
2 1891 bp 29.14 5.71 99.31
NECEvent2014_3_2_scaffold_2002 173_006_scaffold_2002
Species: Clostridium sp. IBUN125C (100%)
1 1208 bp 30.63 5.71 92.63
NECEvent2014_3_2_scaffold_1716 173_006_scaffold_1716
Species: Clostridium butyricum (50%)
2 1366 bp 27.75 5.71 77.53
NECEvent2014_3_2_scaffold_1902 173_006_scaffold_1902
Species: Clostridium butyricum (100%)
1 1252 bp 28.59 5.75 94.89
NECEvent2014_3_2_scaffold_398 173_006_scaffold_398
Genus: Clostridium (100%)
3 3491 bp 28.99 5.76 89.72
NECEvent2014_3_2_scaffold_837 173_006_scaffold_837
Species: Clostridium butyricum (100%)
1 2234 bp 29.63 5.77 88.23
NECEvent2014_3_2_scaffold_2038 173_006_scaffold_2038
Species: Clostridium butyricum (100%)
1 1193 bp 30.34 5.78 99.83
NECEvent2014_3_2_scaffold_2322 173_006_scaffold_2322
Species: Clostridium sp. IBUN13A (100%)
1 1088 bp 27.94 5.79 99.82
NECEvent2014_3_2_scaffold_1923 173_006_scaffold_1923
Species: Clostridium sp. IBUN13A (100%)
1 1242 bp 32.61 5.80 99.76
NECEvent2014_3_2_scaffold_1158 173_006_scaffold_1158
Species: Clostridium butyricum (50%)
2 1811 bp 26.89 5.80 96.25
NECEvent2014_3_2_scaffold_2326 173_006_scaffold_2326
Species: Clostridium butyricum (50%)
2 1087 bp 30.27 5.80 104.32
NECEvent2014_3_2_scaffold_2337 173_006_scaffold_2337
Species: Clostridium butyricum (100%)
1 1086 bp 28.64 5.80 99.72
NECEvent2014_3_2_scaffold_2343 173_006_scaffold_2343
Species: Clostridium butyricum (100%)
1 1083 bp 26.50 5.82 93.91
NECEvent2014_3_2_scaffold_2352 173_006_scaffold_2352
Species: Clostridium sp. IBUN125C (100%)
1 1081 bp 29.79 5.83 99.91
NECEvent2014_3_2_scaffold_1330 173_006_scaffold_1330
Species: Clostridium butyricum (100%)
2 1644 bp 30.47 5.84 94.16
NECEvent2014_3_2_scaffold_1394 173_006_scaffold_1394
Species: Clostridium butyricum (100%)
2 1593 bp 27.18 5.84 90.40
NECEvent2014_3_2_scaffold_2478 173_006_scaffold_2478
Species: Clostridium sp. IBUN125C (100%)
1 1028 bp 28.70 5.84 96.30
NECEvent2014_3_2_scaffold_1604 173_006_scaffold_1604
Species: Clostridium butyricum (66.67%)
3 1436 bp 28.83 5.85 90.88
NECEvent2014_3_2_scaffold_1856 173_006_scaffold_1856
Species: Clostridium ultunense (50%)
2 1280 bp 29.22 5.86 94.22
NECEvent2014_3_2_scaffold_2071 173_006_scaffold_2071
Species: Clostridium sp. IBUN125C (100%)
1 1177 bp 30.59 5.86 99.66
NECEvent2014_3_2_scaffold_2085 173_006_scaffold_2085
Species: Clostridium sp. IBUN13A (100%)
1 1174 bp 28.71 5.88 89.95
NECEvent2014_3_2_scaffold_2092 173_006_scaffold_2092
Species: Clostridium butyricum (100%)
2 1169 bp 29.51 5.90 99.57
NECEvent2014_3_2_scaffold_1979 173_006_scaffold_1979
Species: Clostridium sp. IBUN125C (100%)
2 1219 bp 27.24 5.91 75.06
NECEvent2014_3_2_scaffold_2395 173_006_scaffold_2395
Species: Clostridium butyricum (100%)
1 1064 bp 26.79 5.92 99.81
NECEvent2014_3_2_scaffold_2519 173_006_scaffold_2519
Species: Clostridium butyricum (100%)
2 1013 bp 31.19 5.92 98.91
NECEvent2014_3_2_scaffold_1012 173_006_scaffold_1012
Species: Clostridium butyricum (50%)
2 1975 bp 27.85 5.92 93.87
NECEvent2014_3_2_scaffold_2396 173_006_scaffold_2396
Species: Clostridium sp. IBUN13A (100%)
1 1063 bp 30.67 5.93 84.95
NECEvent2014_3_2_scaffold_1302 173_006_scaffold_1302
Species: Clostridium sp. IBUN125C (100%)
1 1667 bp 29.63 5.94 83.32
NECEvent2014_3_2_scaffold_2111 173_006_scaffold_2111
Species: Clostridium sp. IBUN125C (50%)
2 1161 bp 31.87 5.94 99.22
NECEvent2014_3_2_scaffold_1492 173_006_scaffold_1492
Species: Clostridium sp. IBUN125C (100%)
2 1516 bp 28.23 5.94 100.13
NECEvent2014_3_2_scaffold_1885 173_006_scaffold_1885
Species: Clostridium butyricum (100%)
1 1260 bp 28.41 5.95 43.10
NECEvent2014_3_2_scaffold_1644 173_006_scaffold_1644
Species: Clostridium butyricum (100%)
1 1412 bp 30.45 5.95 99.86
NECEvent2014_3_2_scaffold_1728 173_006_scaffold_1728
Species: Clostridium butyricum (50%)
2 1362 bp 28.05 5.95 96.48
NECEvent2014_3_2_scaffold_1161 173_006_scaffold_1161
Species: Clostridium butyricum (50%)
2 1808 bp 31.19 5.97 91.59
NECEvent2014_3_2_scaffold_823 173_006_scaffold_823
Species: Clostridium butyricum (66.67%)
3 2252 bp 28.91 5.99 98.71
NECEvent2014_3_2_scaffold_1740 173_006_scaffold_1740
Species: Clostridium butyricum (50%)
4 1349 bp 28.61 6.00 76.72
NECEvent2014_3_2_scaffold_1823 173_006_scaffold_1823
Species: Clostridium butyricum (100%)
1 1295 bp 29.19 6.02 99.85
NECEvent2014_3_2_scaffold_2506 173_006_scaffold_2506
Species: Clostridium sp. IBUN13A (100%)
1 1017 bp 30.19 6.05 85.25
NECEvent2014_3_2_scaffold_2175 173_006_scaffold_2175
Species: Clostridium sp. IBUN125C (50%)
2 1136 bp 29.40 6.07 89.00
NECEvent2014_3_2_scaffold_1940 173_006_scaffold_1940
Species: Clostridium sp. IBUN125C (100%)
1 1235 bp 28.66 6.07 80.89
NECEvent2014_3_2_scaffold_1855 173_006_scaffold_1855
Species: Clostridium sp. IBUN13A (100%)
1 1280 bp 30.47 6.09 89.06
NECEvent2014_3_2_scaffold_1174 173_006_scaffold_1174
Species: Clostridium butyricum (100%)
2 1797 bp 28.99 6.09 82.30
Displaying items 151-200 of 1098 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.