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NECEvent2014_3_2_Clostridium_butyricum_31_11

NECEvent2014_3_2_Clostridium_31_11
In projects: NECEvent2014_3_2

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 251-300 of 1098 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_3_2_scaffold_2233 173_006_scaffold_2233
Species: Clostridium sp. IBUN125C (50%)
2 1116 bp 28.32 4.84 86.29
NECEvent2014_3_2_scaffold_285 173_006_scaffold_285
Species: Clostridium sp. IBUN125C (66.67%)
3 4122 bp 30.96 11.03 86.32
NECEvent2014_3_2_scaffold_779 173_006_scaffold_779
Species: Clostridium butyricum (50%)
2 2318 bp 31.54 13.65 86.32
NECEvent2014_3_2_scaffold_212 173_006_scaffold_212
Species: Clostridium sp. IBUN125C (50%)
4 4806 bp 30.75 10.67 86.33
NECEvent2014_3_2_scaffold_1817 173_006_scaffold_1817
Species: Clostridium sp. IBUN13A (50%)
2 1299 bp 28.33 4.16 86.37
NECEvent2014_3_2_scaffold_1067 173_006_scaffold_1067
Species: Clostridium butyricum (100%)
1 1906 bp 30.80 15.42 86.41
NECEvent2014_3_2_scaffold_2367 173_006_scaffold_2367
Species: Clostridium sp. IBUN13A (100%)
1 1076 bp 31.41 9.76 86.43
NECEvent2014_3_2_scaffold_2049 173_006_scaffold_2049
Species: Clostridium sp. IBUN125C (100%)
1 1187 bp 28.14 4.30 86.44
NECEvent2014_3_2_scaffold_1460 173_006_scaffold_1460
Species: Clostridium butyricum (50%)
2 1537 bp 31.49 6.44 86.47
NECEvent2014_3_2_scaffold_913 173_006_scaffold_913
Species: Clostridium butyricum (66.67%)
3 2112 bp 30.40 7.74 86.51
NECEvent2014_3_2_scaffold_1335 173_006_scaffold_1335
Species: Clostridium sp. IBUN125C (66.67%)
3 1640 bp 28.54 11.52 86.52
NECEvent2014_3_2_scaffold_590 173_006_scaffold_590
Species: Clostridium sp. IBUN13A (100%)
1 2770 bp 28.84 7.69 86.53
NECEvent2014_3_2_scaffold_801 173_006_scaffold_801
Species: Clostridium butyricum (100%)
2 2284 bp 31.48 13.13 86.56
NECEvent2014_3_2_scaffold_564 173_006_scaffold_564
Genus: Clostridium (75%)
4 2842 bp 30.54 6.91 86.56
NECEvent2014_3_2_scaffold_710 173_006_scaffold_710
Species: Clostridium sp. IBUN13A (66.67%)
3 2433 bp 30.46 7.03 86.56
NECEvent2014_3_2_scaffold_2287 173_006_scaffold_2287
Species: Clostridium sp. IBUN13A (100%)
1 1098 bp 27.32 4.37 86.61
NECEvent2014_3_2_scaffold_1493 173_006_scaffold_1493
Species: Clostridium sp. IBUN125C (50%)
2 1513 bp 30.47 14.67 86.65
NECEvent2014_3_2_scaffold_622 173_006_scaffold_622
Species: Clostridium butyricum (100%)
2 2654 bp 29.99 7.12 86.70
NECEvent2014_3_2_scaffold_1810 173_006_scaffold_1810
Species: Clostridium butyricum (50%)
2 1304 bp 29.37 6.44 86.73
NECEvent2014_3_2_scaffold_1602 173_006_scaffold_1602
Species: Clostridium butyricum (100%)
2 1438 bp 31.57 13.35 86.79
NECEvent2014_3_2_scaffold_1898 173_006_scaffold_1898
Species: Clostridium sp. IBUN125C (100%)
1 1254 bp 31.26 10.29 86.84
NECEvent2014_3_2_scaffold_1485 173_006_scaffold_1485
Species: Clostridium sp. IBUN13A (50%)
2 1520 bp 28.95 9.87 86.84
NECEvent2014_3_2_scaffold_2405 173_006_scaffold_2405
Species: Clostridium sp. IBUN125C (100%)
1 1057 bp 27.63 8.80 86.85
NECEvent2014_3_2_scaffold_1380 173_006_scaffold_1380
Species: Clostridium butyricum (66.67%)
3 1606 bp 30.76 9.43 86.86
NECEvent2014_3_2_scaffold_690 173_006_scaffold_690
Species: Clostridium butyricum (50%)
2 2490 bp 30.44 10.00 86.87
NECEvent2014_3_2_scaffold_1529 173_006_scaffold_1529
Species: Clostridium butyricum (100%)
2 1488 bp 30.38 8.67 86.90
NECEvent2014_3_2_scaffold_991 173_006_scaffold_991
Species: Clostridium sp. IBUN125C (100%)
2 1998 bp 29.78 9.46 86.94
NECEvent2014_3_2_scaffold_729 173_006_scaffold_729
Species: Clostridium butyricum (100%)
2 2406 bp 29.93 22.01 87.03
NECEvent2014_3_2_scaffold_2423 173_006_scaffold_2423
Species: Clostridium sp. IBUN125C (100%)
1 1051 bp 31.40 9.71 87.06
NECEvent2014_3_2_scaffold_718 173_006_scaffold_718
Species: Clostridium butyricum (50%)
2 2424 bp 30.32 10.02 87.13
NECEvent2014_3_2_scaffold_588 173_006_scaffold_588
Species: Clostridium butyricum (50%)
2 2775 bp 33.23 19.62 87.14
NECEvent2014_3_2_scaffold_2084 173_006_scaffold_2084
Species: Clostridium butyricum (100%)
2 1174 bp 27.51 5.11 87.14
NECEvent2014_3_2_scaffold_342 173_006_scaffold_342
Species: Clostridium butyricum (80%)
5 3766 bp 28.81 7.81 87.15
NECEvent2014_3_2_scaffold_529 173_006_scaffold_529
Genus: Clostridium (100%)
3 2928 bp 30.81 10.96 87.19
NECEvent2014_3_2_scaffold_368 173_006_scaffold_368
Species: Clostridium sp. IBUN125C (100%)
1 3646 bp 32.91 13.95 87.30
NECEvent2014_3_2_scaffold_1144 173_006_scaffold_1144
Species: Clostridium butyricum (100%)
2 1828 bp 32.82 14.93 87.31
NECEvent2014_3_2_scaffold_1414 173_006_scaffold_1414
Species: Clostridium butyricum (66.67%)
3 1581 bp 30.93 9.49 87.48
NECEvent2014_3_2_scaffold_655 173_006_scaffold_655
Species: Clostridium butyricum (100%)
2 2548 bp 32.34 12.13 87.48
NECEvent2014_3_2_scaffold_1478 173_006_scaffold_1478
Species: Clostridium sp. IBUN13A (100%)
1 1526 bp 32.70 13.37 87.48
NECEvent2014_3_2_scaffold_1807 173_006_scaffold_1807
Species: Clostridium sp. IBUN22A (100%)
1 1306 bp 34.07 17.46 87.52
NECEvent2014_3_2_scaffold_1248 173_006_scaffold_1248
Species: Clostridium butyricum (66.67%)
3 1717 bp 31.97 11.36 87.54
NECEvent2014_3_2_scaffold_1551 173_006_scaffold_1551
Species: Clostridium butyricum (100%)
1 1477 bp 31.42 14.83 87.54
NECEvent2014_3_2_scaffold_507 173_006_scaffold_507
Species: Clostridium butyricum (100%)
2 3005 bp 30.85 10.58 87.55
NECEvent2014_3_2_scaffold_1568 173_006_scaffold_1568
Species: Clostridium butyricum (100%)
1 1469 bp 30.91 13.68 87.61
NECEvent2014_3_2_scaffold_616 173_006_scaffold_616
Species: Clostridium sp. IBUN125C (60%)
5 2681 bp 28.68 6.38 87.62
NECEvent2014_3_2_scaffold_2373 173_006_scaffold_2373
Species: Clostridium butyricum (100%)
1 1075 bp 27.63 5.30 87.63
NECEvent2014_3_2_scaffold_498 173_006_scaffold_498
Species: Clostridium butyricum (60%)
5 3057 bp 32.94 17.52 87.63
NECEvent2014_3_2_scaffold_208 173_006_scaffold_208
Species: Clostridium butyricum (66.67%)
3 4854 bp 29.50 8.78 87.70
NECEvent2014_3_2_scaffold_392 173_006_scaffold_392
Species: Clostridium butyricum (100%)
3 3507 bp 31.31 9.84 87.77
NECEvent2014_3_2_scaffold_932 173_006_scaffold_932
Species: Clostridium butyricum (66.67%)
3 2088 bp 32.61 14.66 87.79
Displaying items 251-300 of 1098 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.