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NECEvent2014_3_3_scaffold_258

Alias: 173_001_scaffold_258

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_258_1
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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318..1907
DNA (1590bp) protein (530aa)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Citrobacter sp. KTE151 RepID=R8WIM6_9ENTR rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; E
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
NECEvent2014_3_3_scaffold_258_2
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1923..3212
DNA (1290bp) protein (430aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Citrobacter sp. KTE32 RepID=R8V049_9ENTR rbh
NECEvent2014_3_3_scaffold_258_3
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3209..4534)
DNA (1326bp) protein (442aa)
Transcriptional regulatory protein zraR n=1 Tax=Citrobacter sp. KTE151 RepID=R8WIN9_9ENTR rbh
Transcriptional regulatory protein zraR {ECO:0000313|EMBL:EOQ44763.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" sourc
transcriptional regulator
NECEvent2014_3_3_scaffold_258_4
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4540..5925)
DNA (1386bp) protein (462aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
sensor protein ZraS n=1 Tax=Citrobacter freundii RepID=UPI0002DF4FFA rbh
sensor protein ZraS
NECEvent2014_3_3_scaffold_258_5
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6190..6630
DNA (441bp) protein (147aa)
Zinc resistance-associated protein n=2 Tax=Citrobacter RepID=R8UVP4_9ENTR rbh
Zinc resistance-associated protein {ECO:0000313|EMBL:EOQ44761.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Ci
zraP; zinc resistance protein
NECEvent2014_3_3_scaffold_258_6
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6690..7382)
DNA (693bp) protein (231aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=R8UVW1_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:EOQ44760.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter s
membrane protein
NECEvent2014_3_3_scaffold_258_7
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7394..7666)
DNA (273bp) protein (91aa)
DNA-binding protein HU-alpha n=586 Tax=Enterobacteriaceae RepID=DBHA_SALTI
transcriptional regulator HU subunit alpha
DNA-binding protein HU-alpha {ECO:0000313|EMBL:ACH51095.1}; TaxID=454166 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella
NECEvent2014_3_3_scaffold_258_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7853..8443)
DNA (591bp) protein (197aa)
Uncharacterized protein n=6 Tax=Enterobacteriaceae RepID=I6G6H7_SHIFL rbh
Uncharacterized protein {ECO:0000313|EMBL:KJC04472.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comple
hypothetical protein rbh
NECEvent2014_3_3_scaffold_258_9
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8477..9157)
DNA (681bp) protein (227aa)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-
endonuclease V (EC:3.1.21.7)
endonuclease VIII n=1 Tax=Citrobacter freundii RepID=UPI0002D65AB7 rbh
NECEvent2014_3_3_scaffold_258_10
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9167..10231)
DNA (1065bp) protein (355aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Citrobacter sp. KTE151 RepID=R8WJJ7_9ENTR rbh
NECEvent2014_3_3_scaffold_258_11
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10275..11048)
DNA (774bp) protein (258aa)
NADH pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016168}; EC=3.6.1.22 {ECO:0000256|HAMAP-Rule:MF_00297};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteri
NADH pyrophosphatase n=2 Tax=Citrobacter RepID=R8UVV5_9ENTR rbh
nudC; NADH pyrophosphatase
NECEvent2014_3_3_scaffold_258_12
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11145..11633
DNA (489bp) protein (163aa)
Regulator of sigma D n=2 Tax=Citrobacter RepID=R8V037_9ENTR rbh
Regulator of sigma D {ECO:0000256|HAMAP-Rule:MF_01181, ECO:0000256|SAAS:SAAS00010112}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrob
anti-RNA polymerase sigma 70 factor
NECEvent2014_3_3_scaffold_258_13
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11889..13787
DNA (1899bp) protein (633aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidi
Phosphomethylpyrimidine synthase n=1 Tax=Citrobacter sp. KTE151 RepID=R8WIM9_9ENTR rbh
thiamine biosynthesis protein ThiC
NECEvent2014_3_3_scaffold_258_14
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13787..14422
DNA (636bp) protein (212aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Citrobacter sp. KTE32 RepID=R8UV20_9ENTR rbh
NECEvent2014_3_3_scaffold_258_15
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14415..15173
DNA (759bp) protein (253aa)
Sulfur carrier protein ThiS adenylyltransferase n=2 Tax=Citrobacter RepID=R8UVN4_9ENTR rbh
Sulfur carrier protein ThiS adenylyltransferase {ECO:0000313|EMBL:EOQ44751.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.
thiF; thiamine biosynthesis protein
NECEvent2014_3_3_scaffold_258_16
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15154..15354
DNA (201bp) protein (67aa)
Sulfur carrier protein ThiS n=2 Tax=Citrobacter RepID=R8UVU9_9ENTR
Sulfur carrier protein ThiS {ECO:0000313|EMBL:EOQ44750.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobact
thiS; thiamine biosynthesis protein ThiS
NECEvent2014_3_3_scaffold_258_17
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15356..16126
DNA (771bp) protein (257aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter
Thiazole synthase n=1 Tax=Citrobacter sp. KTE32 RepID=R8V029_9ENTR rbh
thiG; thiazole synthase
NECEvent2014_3_3_scaffold_258_18
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16123..17256
DNA (1134bp) protein (378aa)
2-iminoacetate synthase n=1 Tax=Citrobacter sp. KTE32 RepID=R8UWR3_9ENTR rbh
Thiamine biosynthesis protein ThiH {ECO:0000313|EMBL:KKC61566.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citr
thiH; thiamine biosynthesis protein ThiH
NECEvent2014_3_3_scaffold_258_19
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17377..17589)
DNA (213bp) protein (71aa)
Cold shock-like protein CspI n=2 Tax=Citrobacter RepID=R8UV14_9ENTR
Cold shock-like protein CspI {ECO:0000313|EMBL:EOQ44747.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobac
cold-shock DNA-binding protein family protein
NECEvent2014_3_3_scaffold_258_20
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18680..18985
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=R8UVM9_9ENTR
PTS cellobiose transporter subunit IIB {ECO:0000313|EMBL:KKC61564.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="
hypothetical protein
NECEvent2014_3_3_scaffold_258_21
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18990..19307
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=R8UVU4_9ENTR
PTS lactose transporter subunit IIA {ECO:0000313|EMBL:KKC61563.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Cit
PTS lactose transporter subunit IIA
NECEvent2014_3_3_scaffold_258_22
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19455..22658)
DNA (3204bp) protein (1068aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=2 Tax=Citrobacter RepID=R8V023_9ENTR rbh
Displaying 22 items

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