ggKbase home page

NECEvent2014_3_3_scaffold_321

Alias: 173_001_scaffold_321

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_321_1
unknown

Not on your lists

comp(3..77)
DNA (75bp) protein (25aa)

This feature has no annotations

NECEvent2014_3_3_scaffold_321_2
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(320..1360)
DNA (1041bp) protein (347aa)
Strongly similar to alcohol dehydrogenase {ECO:0000313|EMBL:CAJ74389.1}; EC=1.1.1.2 {ECO:0000313|EMBL:CAJ74389.1};; TaxID=174633 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadial
Strongly similar to alcohol dehydrogenase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q2Z1_9BACT rbh
NADP-dependent alcohol dehydrogenase
NECEvent2014_3_3_scaffold_321_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1668..2696
DNA (1029bp) protein (343aa)
Uncharacterized protein n=7 Tax=Clostridium clostridioforme RepID=N9WAW3_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ58920.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
zraR2; transcriptional regulatory protein ZraR
NECEvent2014_3_3_scaffold_321_4
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2993..3934
DNA (942bp) protein (314aa)
ATPase associated with various cellular activities AAA_3 n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MK52_ALKOO rbh
ATPase
ATPase associated with various cellular activities AAA_3 {ECO:0000313|EMBL:ABW20184.1}; Flags: Precursor;; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkali
NECEvent2014_3_3_scaffold_321_5
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3927..5135
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MK51_ALKOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW20183.1}; Flags: Precursor;; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus or
NECEvent2014_3_3_scaffold_321_6
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5128..7386
DNA (2259bp) protein (753aa)
Transglutaminase domain protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MK50_ALKOO rbh
transglutaminase domain-containing protein
Transglutaminase domain protein {ECO:0000313|EMBL:ABW20182.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (s
NECEvent2014_3_3_scaffold_321_7
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7708..9471)
DNA (1764bp) protein (588aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1354301 species="Bacteria; Fir
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Clostridium sp. BL8 RepID=T0NCL5_9CLOT rbh
NECEvent2014_3_3_scaffold_321_8
Candidatus Liberibacter solanacearum, Candidatus Liberibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9929..10330)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Liberibacter solanacearum (strain CLso-ZC1) RepID=E4UBI6_LIBSC
Uncharacterized protein {ECO:0000313|EMBL:ADR52492.1}; TaxID=658172 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Candidatus Liberibacter.;" source="Liberibacter s
hypothetical protein
NECEvent2014_3_3_scaffold_321_9
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11102..11566)
DNA (465bp) protein (155aa)
SsrA-binding protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZBT3_9CLOT
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
smpB; SsrA-binding protein
NECEvent2014_3_3_scaffold_321_10
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11631..13742)
DNA (2112bp) protein (704aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1288971 species="Bacteria; Firmicutes; Clostri
rnr; ribonuclease R (EC:3.1.-.-)
Ribonuclease R n=1 Tax=Clostridium ultunense Esp RepID=M1ZB91_9CLOT rbh
NECEvent2014_3_3_scaffold_321_11
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13845..15014)
DNA (1170bp) protein (390aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Clostridium ultunense Esp RepID=M1YXF0_9CLOT rbh
NECEvent2014_3_3_scaffold_321_12
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15044..16222)
DNA (1179bp) protein (393aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clost
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Clostridium ultunense Esp RepID=M1ZAF9_9CLOT rbh
Displaying 12 items

View Taxonomy