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NECEvent2014_3_3_scaffold_530

Alias: 173_001_scaffold_530

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_530_1
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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80..775
DNA (696bp) protein (232aa)
Cyclase family protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZLY8_9CLOT
Cyclase family protein {ECO:0000313|EMBL:CCQ98027.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
cyclase family protein
NECEvent2014_3_3_scaffold_530_2
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(902..1021)
DNA (120bp) protein (40aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI000305DB30
Uncharacterized protein {ECO:0000313|EMBL:EQB86227.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
NECEvent2014_3_3_scaffold_530_3
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1352..2821
DNA (1470bp) protein (490aa)
ABC transporter n=4 Tax=Bacteria RepID=E5VDI5_9BACE rbh
ABC transporter {ECO:0000313|EMBL:EFV25106.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
NECEvent2014_3_3_scaffold_530_4
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2873..3136)
DNA (264bp) protein (88aa)
MaoC-like protein n=1 Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2J992_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KAJ52010.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.
hypothetical protein
NECEvent2014_3_3_scaffold_530_5
Peptostreptococcaceae bacterium oral taxon 113, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3137..3445)
DNA (309bp) protein (103aa)
NifU-like protein n=1 Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2L053_9FIRM
NifU-like protein {ECO:0000313|EMBL:ERJ82819.1}; TaxID=1321784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium oral taxon 113
nitrogen-fixing NifU domain-containing protein
NECEvent2014_3_3_scaffold_530_6
[Eubacterium] yurii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3478..4941)
DNA (1464bp) protein (488aa)
Gamma-aminobutyrate metabolism dehydratase/isomerase {ECO:0000313|EMBL:EFM38416.1}; EC=4.2.1.- {ECO:0000313|EMBL:EFM38416.1};; EC=5.3.3.3 {ECO:0000313|EMBL:EFM38416.1};; TaxID=864565 species="Bacteria
Vinylacetyl-CoA Delta-isomerase (EC:5.3.3.3)
Gamma-aminobutyrate metabolism dehydratase/isomerase n=1 Tax=Eubacterium yurii subsp. margaretiae ATCC 43715 RepID=E0QLC6_9FIRM rbh
NECEvent2014_3_3_scaffold_530_7
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5012..6313)
DNA (1302bp) protein (434aa)
Acetyl-CoA hydrolase/transferase n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LV90_CLOB8 rbh
acetyl-CoA hydrolase/transferase
Acetyl-CoA hydrolase/transferase {ECO:0000313|EMBL:AKA70746.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
NECEvent2014_3_3_scaffold_530_8
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(6324..7439)
DNA (1116bp) protein (372aa)
Alcohol dehydrogenase, class IV n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0K074_9FIRM rbh
Alcohol dehydrogenase, class IV {ECO:0000313|EMBL:EQB27408.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 26
hypothetical protein
NECEvent2014_3_3_scaffold_530_9
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7462..8823)
DNA (1362bp) protein (454aa)
succinate-semialdehyde dehydrogenase n=1 Tax=Clostridium arbusti RepID=UPI00028820E9 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKA70745.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
NECEvent2014_3_3_scaffold_530_10
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9102..9536)
DNA (435bp) protein (145aa)
transcriptional regulator n=1 Tax=Clostridium beijerinckii RepID=UPI0002D69682
Sigma-54 dependent transcription regulator {ECO:0000313|EMBL:AJG98996.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijer
sigma-54 dependent transcription regulator
Displaying 10 items

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