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NECEvent2014_3_3_scaffold_591

Alias: 173_001_scaffold_591

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_591_1
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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184..1383
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Dehalobacter sp. UNSWDHB RepID=T0JE61_9FIRM rbh
relaxase/mobilization nuclease family protein
Relaxase/mobilization nuclease family protein {ECO:0000313|EMBL:AHM55939.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium
NECEvent2014_3_3_scaffold_591_2
Lachnospiraceae oral taxon 107, Clostridiales, Clostridia, Firmicutes, Bacteria

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2001..2237
DNA (237bp) protein (79aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Lachnospiraceae oral taxon 107 str. F0167 RepID=F3B7E7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG89067.1}; Flags: Fragment;; TaxID=575593 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae oral taxon 10
Site-specific recombinase XerD
NECEvent2014_3_3_scaffold_591_3
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2840..4405)
DNA (1566bp) protein (522aa)
hypothetical protein n=1 Tax=Desulfitobacterium hafniense RepID=UPI00037720E0 rbh
M23 peptidase domain protein {ECO:0000313|EMBL:CDX00646.1}; TaxID=49338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafni
peptidase M56 BlaR1
NECEvent2014_3_3_scaffold_591_4
Paenibacillus sp. FSL R5-192, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4398..4796)
DNA (399bp) protein (133aa)
CopY family transcriptional regulator n=1 Tax=Paenibacillus sp. PAMC 26794 RepID=UPI00036ACB1C
CopY family transcriptional repressor {ECO:0000313|EMBL:ETT36561.1}; TaxID=1226754 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL
CopY family transcriptional repressor
NECEvent2014_3_3_scaffold_591_5
unknown

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comp(5198..6271)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P0K9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL38320.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
NECEvent2014_3_3_scaffold_591_6
unknown

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comp(6394..6810)
DNA (417bp) protein (139aa)

This feature has no annotations

NECEvent2014_3_3_scaffold_591_7
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7400..7771)
DNA (372bp) protein (124aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium termitidis CT1112 RepID=S0FKE0_9CLOT
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EMS72680.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clost
DNA-directed RNA polymerase specialized sigma subunit, sigma24
NECEvent2014_3_3_scaffold_591_8
unknown

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comp(7927..8046)
DNA (120bp) protein (40aa)

This feature has no annotations

NECEvent2014_3_3_scaffold_591_9
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8260..8664)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KFC6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL01883.1}; Flags: Precursor;; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotoma
Displaying 9 items

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