ggKbase home page
Advanced Search
Search Help

NECEvent2014_3_4_Veillonella_parvula-rel_38_333_scaffold_5_7

Organism: NECEvent2014_3_4_Veillonella_parvula-rel_38_333_plum

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(10154..14314)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2765
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta n=3 Tax=Veillonella parvula RepID=D1YMY4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2765
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 999.99
  • Bit_score: 2755
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Veillonella parvula → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 4161
ATGTTCAAACCTGAACAGGTAGGCAAACGAACTCGTTATACGTACGCTAAAATTAACGAAGTTATCAAGATGCCGCATTTATTGGACATTCAACGTAAATCGTATGAGTGGTTCTTGGAGAGTGGTTTACAAAATATTTTCAACGATATTTCTCCGATTAAAGACAATTCAGGTAATCTAGTACTTTCTTTTGAAGGTTTCAGCTTAGGTGAACCTAAGTATGATATTAATGAATGTAAAAACCGTGATGCTACTTACGCAGCACCACTTCGTGTAAATATTCGCTTGGTAAATAATGATCCAGAAAATATGGACATTAAAGAACAAGAAGTCTTCATGGGCGATTTCCCATTGATGACGGATACAGGTACTTTCATCATCAATGGTGCAGAACGTGTTATCGTATCCCAATTAGTACGTTCTCCAGGCGTTTACTACAATAAAGAAATCGATACAATGGGTAACCGTTTGTATGATTCCACAGTTATTCCTAACCGTGGTGCATGGATTGAACTTGAAACAGATGCTAGTGAAGTGGTGGCTGTTCGTATTGACCGTAACCGTAAATTACCAGCTACTGTATTGGTACGTGCATTAGGTTGGGATACGAATGAAAGTATCCTCGACCTCTTCTGGAATGGTAAAACTGATGAGGATGGTTTACCAGTATATGATGAACGCATCGTTCGTACATTAGAAAAAGATACAACTCAATCTGCTGATGAAGCATTGGTTGAAATCTATAAAAAATTACGTCCAGGCGAGCCTCCGACTGTAGAGTCTGCTCGTAACTTGTTCGATAACTTGTTCTTCGATGCACGCCGTTATGACTTAGCGCGCGTTGGTCGTTATAAATTGAACAAAAAACTTGGCTGGCGCCAACGTATGTTGGGTCAAACATTAGCTCAACCAATTGTAGATCCAGAAACTGGCGAAATTATCCTTGATGCAGGCGTACAAGTTGGGGAAGAACAACTTGATATCGTTGCTAATAGCCATGTTTTCGATGGTGAAGGTTTTGCTGAATTCTATATCGTAAATAATGATGGTGTAGAGTCTAAAGTTATCTGTAATAACTGCAACTTACCATATGATCACCGTACAGTAACACGTGAAGACATGATCGCTAACATTTCTTACTTGCTCAACCTTATGGATGGTGCAGGTCATACAGATGATATCGACCACTTGGGTAACCGTCGCCTTCGTTGCGTAGGCGAATTGTTGCAAAACCAATTCCGCATCGGTTTAACTCGTATGGAACGTGTTGTTCGTGAGCGCATGACCATTCAAGAAACTGAATCCATTACACCTCAAGCGTTGATCAATATTCGCCCTGTAGTGGCAGCTATCAAAGAATTCTTTGGTTCTTCTCAATTGTCTCAGTTCATGGACCAAACAAACCCATTGGCGGAATTGACTCACAAACGTCGTCTTTCTGCCCTTGGCCCTGGCGGCTTGTCTCGTGAGCGTGCAGGTTTCGAAGTTCGTGACGTGCATCATTCTCACTATGGTCGTATGTGTCCTATTGAAACTCCAGAAGGTCCAAACATTGGCTTGATTAACTCCTTGTCCAACTATGCAAAGGTAAACGAATTTGGCTTCATCGAAGCACCATACCGTAAAGTAGAAAAAGTGTATGGTAAAGGCAAGGATGCTGATAAAGTTGTTAAAGTGCGCGTATCTGATAGCGTAGTATACATGACCGCTGATGAAGAAGAAGGCATGACAATTGCCCAAGCAAACTCTCCGCTTGATGCAGAGGGGTACTTCACAACTGAACATGTTGCTTGTCGTCGTGGTCATGATGTATTGGAAGTTACACCAGATAAGGTTGACTATATGGACGTTAGTCCAAAAGAAGTTGTATCTATTGGTACAGCTATGATTCCATTCCTTGAAAATGATGATGCTAACCGTGCCTTGATGGGCGCGAACATGCAACGTCAAGCGGTACCACTTTTGCGTGCTCAAGCACCACTTGTTGGTACAGGTATGGAATATACAGCAGCTACTGACTCTGGTGTTTGCGTATTGGCGCGTGAAGCAGGTAAAGTTGTACGTTGTTGGGGTAATGAAATCCACGTTCTTCGCGATAGCGATGGTCGTGTTGATACATACCATTTGAATAAATTCCTTCGTTCTAACCAATCCACATGCTTTAACCAAAAACCAATCGTCAATCGTGGGGACCATGTTGTAAAAGGCCAAGTACTGGCTGATGGTCCTGCTACAGATGGCGGCGAATTGGCATTAGGTTATAACGTTCTCGTAGCGTTCATGCCTTGGGAAGGTTATAACTACGAAGATGCTATCTTGCTTAGTGAAGAACTATGCAAAGAAGATATCTATACATCCATTCATATTGAAGAATACGAATGTGATGCGCGTGATACCAAATTAGGTGCTGAAGAAATTACTCGTGAGTTGCCTAATACGGGTGACGACACACTTAAAAACTTAGACGAAGATGGTATTATCTGCATTGGTGCAGAAGTACATCCTGGCGATATCCTCGTAGGTAAAGCTACTCCAAAAGGTGAAACTGAGCTTACTCCAGAAGAACGTTTGTTGCGTGCTATTTTTGGTGACAAAGAACGTGAAGTTCGCGACACTTCCTTGCGCGTGCCTCATGGCGAATCTGGTAAAGTCGTAGATGTAAAAGTCTTTACCCGTGAAAATGGCGATGAATTACAACCAGGCGTAAATAAACTTGTTCGCGTATATATCGCTCAAAAACGTAAGATTCATGAAGGCGATAAAATGGCGGGCCGTCATGGTAACAAAGGTGTCGTTTCTCGCGTTATGAGAAAAGAAGATATGCCATTCCTTCCAGATGGTACTCCAGTACAAATCGTATTGAACCCATTGGGCGTACCTTCTCGTATGAACATCGGTCAGGTCCTTGAAACTCACTTGGGGTGGGCTGTTCAAGGCTTAGGTATGAAAATCAAAGCTACAGATCTTCACATTCAAAACGTGTTGAAAGAAGCCCGTACTGATGCATCTTACTGGGAACAAATCGATGCAATCCGCGATCTTTATGCTCAAATTGAAGCATTGGAAGCGAAAGTTGCGGAAGATGTTACGGTAAATCATTTCGAAGAAAATGAGCAAATCATTGCTTTGAAAACTAAAATTTTAAAACATGTAGAAGCAGCAGCGCAAAAGAAATTGGATGCTATGGGTGGCGAAGCTCGTTTCCAAGAGCTTAAAGCTATTGAAGCTAAATACAATGCACTTCATGTAGAATTCTTTGATTCTGAAGAAGAGGCTCCTGAAATGGATCCTGCGCTTGTAGAAGAATTAGAGGCAATTAGTAAAGTTAAAAATACTCTTAACAACATTCACTCTGCTGAAGAAAAACGCGTTGAACTTCGCAAAGAGTTGGAAAGCCTTGGCTATGATTTTGACAAATATGGCATGCCAAAACCAGATGTAGCAGGTATTCATATTGCTACACCTGTATTTGATGGTGCTCACGAAAAGGACGTATTCGAAACATTGGCGATTGCAGGTCGTCCTGATGATGGTAAAACTGTTCTATATGATGGTCGTACTGGTGAACCGATGGATAACCGCGTTACTGTTGGTTACGTTTACATGCTTAAACTCCATCATTTGGTTGATGACAAAATCCATGCTCGTTCTACAGGTCCGTACTCCCTTGTTACACAACAACCTTTGGGCGGTAAAGCTCAGTTCGGTGGCCAACGTTTCGGGGAAATGGAAGTTTGGGCTCTAGAAGCATATGGCGCAGCCTATACCCTTCAAGAGCTATTAACTGTTAAGTCTGACGACGTTGTTGGTCGTGTGAAAGCATACGAAAAAATCGTTAAAGGCGAAAACATCCCTGAACCAGGTGTACCTGAGTCCTTCAAGGTATTGCTTAAAGAACTTCAAAGTATCGGTCTCGATGTAAAAATCTTGAACGAAGATCAAGAAGAAGTTGTTATGAAAGAACTTGAGGACGAAGATGAGGTGGTAGAAACTGGTATTGAAGAAGTTATGGAAGGCAGTGCTGTAGAAACTGATGAAGTAACTGTAGTAGAACCAGAAGTAGAGGAAGAGGAAGAATTACCAGCTGATAATGGCGGTGAAGATGATATCCTTAGCCAATTGGCGTACCCAATGGGCGACTCCTCTAACGATGAAGACTAA
PROTEIN sequence
Length: 1387
MFKPEQVGKRTRYTYAKINEVIKMPHLLDIQRKSYEWFLESGLQNIFNDISPIKDNSGNLVLSFEGFSLGEPKYDINECKNRDATYAAPLRVNIRLVNNDPENMDIKEQEVFMGDFPLMTDTGTFIINGAERVIVSQLVRSPGVYYNKEIDTMGNRLYDSTVIPNRGAWIELETDASEVVAVRIDRNRKLPATVLVRALGWDTNESILDLFWNGKTDEDGLPVYDERIVRTLEKDTTQSADEALVEIYKKLRPGEPPTVESARNLFDNLFFDARRYDLARVGRYKLNKKLGWRQRMLGQTLAQPIVDPETGEIILDAGVQVGEEQLDIVANSHVFDGEGFAEFYIVNNDGVESKVICNNCNLPYDHRTVTREDMIANISYLLNLMDGAGHTDDIDHLGNRRLRCVGELLQNQFRIGLTRMERVVRERMTIQETESITPQALINIRPVVAAIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLINSLSNYAKVNEFGFIEAPYRKVEKVYGKGKDADKVVKVRVSDSVVYMTADEEEGMTIAQANSPLDAEGYFTTEHVACRRGHDVLEVTPDKVDYMDVSPKEVVSIGTAMIPFLENDDANRALMGANMQRQAVPLLRAQAPLVGTGMEYTAATDSGVCVLAREAGKVVRCWGNEIHVLRDSDGRVDTYHLNKFLRSNQSTCFNQKPIVNRGDHVVKGQVLADGPATDGGELALGYNVLVAFMPWEGYNYEDAILLSEELCKEDIYTSIHIEEYECDARDTKLGAEEITRELPNTGDDTLKNLDEDGIICIGAEVHPGDILVGKATPKGETELTPEERLLRAIFGDKEREVRDTSLRVPHGESGKVVDVKVFTRENGDELQPGVNKLVRVYIAQKRKIHEGDKMAGRHGNKGVVSRVMRKEDMPFLPDGTPVQIVLNPLGVPSRMNIGQVLETHLGWAVQGLGMKIKATDLHIQNVLKEARTDASYWEQIDAIRDLYAQIEALEAKVAEDVTVNHFEENEQIIALKTKILKHVEAAAQKKLDAMGGEARFQELKAIEAKYNALHVEFFDSEEEAPEMDPALVEELEAISKVKNTLNNIHSAEEKRVELRKELESLGYDFDKYGMPKPDVAGIHIATPVFDGAHEKDVFETLAIAGRPDDGKTVLYDGRTGEPMDNRVTVGYVYMLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQELLTVKSDDVVGRVKAYEKIVKGENIPEPGVPESFKVLLKELQSIGLDVKILNEDQEEVVMKELEDEDEVVETGIEEVMEGSAVETDEVTVVEPEVEEEEELPADNGGEDDILSQLAYPMGDSSNDED*