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NECEvent2014_3_4_Veillonella_parvula-rel_38_333_scaffold_5

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_Veillonella_parvula-rel_38_333_scaffold_5_1
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(110..2185)
DNA (2076bp) protein (692aa)
Elongation factor G n=4 Tax=Veillonella RepID=D1BP66_VEIPT rbh
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veill rbh
translation elongation factor G
NECEvent2014_3_4_Veillonella_parvula-rel_38_333_scaffold_5_2
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2201..2671)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=12 Tax=Veillonella RepID=D1BP67_VEIPT rbh
30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS- rbh
NECEvent2014_3_4_Veillonella_parvula-rel_38_333_scaffold_5_3
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2724..3098)
DNA (375bp) protein (125aa)
30S ribosomal protein S12 n=13 Tax=Veillonella RepID=D1BP68_VEIPT
30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;"
NECEvent2014_3_4_Veillonella_parvula-rel_38_333_scaffold_5_4
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3175..3420)
DNA (246bp) protein (82aa)
Ribosomal protein L7Ae/L30e/S12e/Gadd45 n=7 Tax=Veillonella RepID=T0UD46_9FIRM
ribosomal protein L7Ae-like protein
Ribosomal protein L7ae family protein {ECO:0000313|EMBL:EFG23244.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp.
NECEvent2014_3_4_Veillonella_parvula-rel_38_333_scaffold_5_5
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3776..5797
DNA (2022bp) protein (674aa)
UPI0003D6938B related cluster n=1 Tax=unknown RepID=UPI0003D6938B rbh
Choline/carnitine/betaine transporter {ECO:0000313|EMBL:ETJ02242.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella di rbh
choline/carnitine/betaine transporter
NECEvent2014_3_4_Veillonella_parvula-rel_38_333_scaffold_5_6
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5922..10124)
DNA (4203bp) protein (1401aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase rbh
DNA-directed RNA polymerase subunit beta' n=4 Tax=Veillonella RepID=T0SUW0_9FIRM rbh
DNA-directed RNA polymerase subunit beta'
NECEvent2014_3_4_Veillonella_parvula-rel_38_333_scaffold_5_7
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(10154..14314)
DNA (4161bp) protein (1387aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su rbh
DNA-directed RNA polymerase subunit beta n=3 Tax=Veillonella parvula RepID=D1YMY4_9FIRM rbh
DNA-directed RNA polymerase subunit beta
NECEvent2014_3_4_Veillonella_parvula-rel_38_333_scaffold_5_8
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(14645..16060)
DNA (1416bp) protein (472aa)
Aspartate ammonia-lyase n=2 Tax=Veillonella RepID=D6KQJ7_9FIRM rbh
Putative aspartate ammonia-lyase {ECO:0000313|EMBL:EGL78350.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula rbh
fumarate lyase
NECEvent2014_3_4_Veillonella_parvula-rel_38_333_scaffold_5_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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16333..17973
DNA (1641bp) protein (547aa)
Glycosyl transferase family 39 n=2 Tax=Veillonella parvula RepID=D1BP74_VEIPT rbh
Uncharacterized protein {ECO:0000313|EMBL:EQC65159.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.; rbh
glycosyl transferase family protein
NECEvent2014_3_4_Veillonella_parvula-rel_38_333_scaffold_5_10
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(18015..18383)
DNA (369bp) protein (123aa)
50S ribosomal protein L7/L12 n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KK29_9FIRM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar
50S ribosomal protein L7/L12
NECEvent2014_3_4_Veillonella_parvula-rel_38_333_scaffold_5_11
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(18454..18951)
DNA (498bp) protein (166aa)
50S ribosomal protein L10 n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KK28_9FIRM rbh
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DOR rbh
50S ribosomal protein L10
NECEvent2014_3_4_Veillonella_parvula-rel_38_333_scaffold_5_12
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(19127..19837)
DNA (711bp) protein (237aa)
50S ribosomal protein L1 n=5 Tax=Veillonella RepID=D1BP77_VEIPT rbh
50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC rbh
NECEvent2014_3_4_Veillonella_parvula-rel_38_333_scaffold_5_13
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(19914..20339)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=12 Tax=Veillonella RepID=D1BP78_VEIPT
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;"
NECEvent2014_3_4_Veillonella_parvula-rel_38_333_scaffold_5_14
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20449..20985)
DNA (537bp) protein (179aa)
Transcription termination/antitermination protein NusG n=3 Tax=Veillonella RepID=T0U5M9_9FIRM rbh
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Ve rbh
NusG antitermination factor
NECEvent2014_3_4_Veillonella_parvula-rel_38_333_scaffold_5_15
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20998..21219)
DNA (222bp) protein (74aa)
Protein translocase subunit SecE n=4 Tax=Veillonella parvula RepID=D1BP80_VEIPT
preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella par
NECEvent2014_3_4_Veillonella_parvula-rel_38_333_scaffold_5_16
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(21263..21412)
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=13 Tax=Veillonella RepID=D1BP81_VEIPT
50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
NECEvent2014_3_4_Veillonella_parvula-rel_38_333_scaffold_5_17
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21683..23920)
DNA (2238bp) protein (746aa)
Nitric oxide reductase large subunit-like protein n=5 Tax=Veillonella RepID=D1BP82_VEIPT rbh
Nitric oxide reductase {ECO:0000313|EMBL:EFG23232.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;" rbh
nitric oxide reductase large subunit-like protein
Displaying 17 items

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