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NECEvent2014_3_4_Clostridium_butyricum_28_15

NECEvent2014_3_4_Clostridium_29_16
In projects: NECEvent2014_3_4

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 101-150 of 209 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_3_4_scaffold_461 173_002_scaffold_461
Species: Clostridium butyricum (50%)
14 11807 bp 29.76 16.57 90.15
NECEvent2014_3_4_scaffold_474 173_002_scaffold_474
Species: Clostridium sp. IBUN125C (50%)
14 11180 bp 27.42 13.59 78.92
NECEvent2014_3_4_scaffold_381 173_002_scaffold_381
Species: Clostridium butyricum (69.23%)
13 18432 bp 28.08 14.37 89.73
NECEvent2014_3_4_scaffold_416 173_002_scaffold_416
Species: Clostridium butyricum (61.54%)
13 14874 bp 29.73 17.39 85.90
NECEvent2014_3_4_scaffold_418 173_002_scaffold_418
Genus: Clostridium (100%)
13 14803 bp 33.44 22.03 88.91
NECEvent2014_3_4_scaffold_431 173_002_scaffold_431
Genus: Clostridium (92.31%)
13 13581 bp 28.79 15.94 80.74
NECEvent2014_3_4_scaffold_493 173_002_scaffold_493
Species: Clostridium butyricum (61.54%)
13 10414 bp 25.50 11.35 83.28
NECEvent2014_3_4_scaffold_522 173_002_scaffold_522
Genus: Clostridium (69.23%)
13 9617 bp 29.10 16.97 81.35
NECEvent2014_3_4_scaffold_339 173_002_scaffold_339
Species: Clostridium sp. IBUN125C (69.23%)
13 23419 bp 28.24 15.41 87.71
NECEvent2014_3_4_scaffold_441 173_002_scaffold_441
Species: Clostridium sp. IBUN125C (75%)
12 12885 bp 29.73 15.97 84.03
NECEvent2014_3_4_scaffold_453 173_002_scaffold_453
Species: Clostridium butyricum (83.33%)
12 12165 bp 29.37 17.52 85.23
NECEvent2014_3_4_scaffold_462 173_002_scaffold_462
Genus: Clostridium (83.33%)
12 11798 bp 27.10 15.18 84.51
NECEvent2014_3_4_scaffold_379 173_002_scaffold_379
Species: Clostridium butyricum (54.55%)
11 18657 bp 30.67 18.23 83.74
NECEvent2014_3_4_scaffold_423 173_002_scaffold_423
Species: Clostridium butyricum (63.64%)
11 14310 bp 28.39 15.57 86.52
NECEvent2014_3_4_scaffold_437 173_002_scaffold_437
Species: Clostridium sp. IBUN125C (54.55%)
11 13180 bp 30.41 15.28 94.51
NECEvent2014_3_4_scaffold_444 173_002_scaffold_444
Species: Clostridium butyricum (54.55%)
11 12690 bp 28.09 15.65 83.92
NECEvent2014_3_4_scaffold_451 173_002_scaffold_451
Genus: Clostridium (100%)
11 12453 bp 27.93 15.88 89.93
NECEvent2014_3_4_scaffold_469 173_002_scaffold_469
Species: Clostridium butyricum (90.91%)
11 11415 bp 26.56 13.82 87.31
NECEvent2014_3_4_scaffold_458 173_002_scaffold_458
Genus: Clostridium (100%)
10 11995 bp 26.63 14.81 90.66
NECEvent2014_3_4_scaffold_465 173_002_scaffold_465
Species: Clostridium sp. IBUN125C (50%)
10 11595 bp 30.17 16.29 80.21
NECEvent2014_3_4_scaffold_482 173_002_scaffold_482
Species: Clostridium butyricum (60%)
10 10774 bp 28.26 15.84 80.89
NECEvent2014_3_4_scaffold_518 173_002_scaffold_518
Species: Clostridium butyricum (50%)
10 9700 bp 29.11 17.09 74.85
NECEvent2014_3_4_scaffold_541 173_002_scaffold_541
Species: Clostridium butyricum (50%)
10 9024 bp 29.43 17.72 85.31
NECEvent2014_3_4_scaffold_818 173_002_scaffold_818
Genus: Clostridium (100%)
10 4883 bp 27.38 13.02 84.23
NECEvent2014_3_4_scaffold_488 173_002_scaffold_488
Genus: Clostridium (100%)
9 10550 bp 28.24 14.45 87.21
NECEvent2014_3_4_scaffold_515 173_002_scaffold_515
Species: Clostridium sp. IBUN125C (55.56%)
9 9777 bp 27.47 14.08 86.35
NECEvent2014_3_4_scaffold_603 173_002_scaffold_603
Genus: Clostridium (88.89%)
9 7635 bp 29.14 20.96 79.45
NECEvent2014_3_4_scaffold_387 173_002_scaffold_387
Genus: Clostridium (100%)
8 17754 bp 28.57 17.29 90.00
NECEvent2014_3_4_scaffold_651 173_002_scaffold_651
Genus: Clostridium (62.5%)
8 6681 bp 27.78 11.07 87.16
NECEvent2014_3_4_scaffold_448 173_002_scaffold_448
Species: Clostridium butyricum (50%)
8 12468 bp 28.86 18.12 86.33
NECEvent2014_3_4_scaffold_730 173_002_scaffold_730
Species: Clostridium sp. IBUN125C (62.5%)
8 5500 bp 26.27 14.92 81.76
NECEvent2014_3_4_scaffold_479 173_002_scaffold_479
Species: Clostridium butyricum (50%)
8 10984 bp 28.25 13.60 86.96
NECEvent2014_3_4_scaffold_516 173_002_scaffold_516
Genus: Clostridium (100%)
8 9750 bp 29.79 17.62 81.60
NECEvent2014_3_4_scaffold_527 173_002_scaffold_527
Species: Clostridium butyricum (87.5%)
8 9299 bp 27.54 12.63 87.59
NECEvent2014_3_4_scaffold_542 173_002_scaffold_542
Species: Clostridium butyricum (87.5%)
8 8952 bp 28.12 15.16 87.37
NECEvent2014_3_4_scaffold_575 173_002_scaffold_575
Species: Clostridium sp. IBUN125C (50%)
8 8090 bp 29.33 15.54 88.52
NECEvent2014_3_4_scaffold_577 173_002_scaffold_577
Species: Clostridium sp. IBUN125C (50%)
8 8063 bp 27.19 12.63 83.19
NECEvent2014_3_4_scaffold_608 173_002_scaffold_608
Species: Clostridium butyricum (62.5%)
8 7466 bp 26.90 15.95 90.17
NECEvent2014_3_4_scaffold_616 173_002_scaffold_616
Species: Clostridium butyricum (85.71%)
7 7301 bp 25.60 12.96 77.04
NECEvent2014_3_4_scaffold_627 173_002_scaffold_627
Genus: Clostridium (85.71%)
7 7134 bp 27.57 15.48 81.79
NECEvent2014_3_4_scaffold_630 173_002_scaffold_630
Genus: Clostridium (71.43%)
7 7091 bp 27.06 15.00 78.95
NECEvent2014_3_4_scaffold_683 173_002_scaffold_683
Genus: Clostridium (100%)
7 6175 bp 26.48 15.72 87.69
NECEvent2014_3_4_scaffold_548 173_002_scaffold_548
Genus: Clostridium (100%)
7 8854 bp 28.42 14.52 80.07
NECEvent2014_3_4_scaffold_554 173_002_scaffold_554
Species: Clostridium butyricum (71.43%)
7 8755 bp 28.17 16.82 83.40
NECEvent2014_3_4_scaffold_576 173_002_scaffold_576
Species: Clostridium sp. IBUN125C (57.14%)
7 8075 bp 28.43 14.41 79.91
NECEvent2014_3_4_scaffold_621 173_002_scaffold_621
Genus: Clostridium (83.33%)
6 7221 bp 29.57 19.34 86.00
NECEvent2014_3_4_scaffold_483 173_002_scaffold_483
Species: Clostridium sp. IBUN125C (66.67%)
6 10747 bp 31.17 18.19 89.77
NECEvent2014_3_4_scaffold_503 173_002_scaffold_503
Species: Clostridium butyricum (50%)
6 10130 bp 28.59 17.09 81.32
NECEvent2014_3_4_scaffold_779 173_002_scaffold_779
Species: Clostridium butyricum (50%)
6 5106 bp 27.16 16.16 94.30
NECEvent2014_3_4_scaffold_792 173_002_scaffold_792
Species: Clostridium butyricum (66.67%)
6 5018 bp 25.37 11.42 87.11
Displaying items 101-150 of 209 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.