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NECEvent2014_3_5_scaffold_527_8

Organism: NECEvent2014_3_5_Atopobium_minutum-rel_49_9

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(8222..8530)

Top 3 Functional Annotations

Value Algorithm Source
UPF0109 protein HMPREF1091_00958 n=2 Tax=Atopobium RepID=N2BYL2_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 102.0
  • Bit_score: 198
  • Evalue 2.50e-48
UPF0109 protein HMPREF1091_00958 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minut similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 102.0
  • Bit_score: 198
  • Evalue 3.50e-48
RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 92.0
  • Bit_score: 135
  • Evalue 7.30e-30

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGTCTTTTGATGCGGAAGAGGAGTACACCCTTACTGCTGATGAGGGAAGTGCCTCTGAGGGTTTGCCATCAGACCAAGTGGCAGATCTTGTTGAGTATGTTGTTTGTGGTTTAGTAGACGACGTCAATTCCGTGTCGCTTGATGTTACCGATAGCGACGATGGAACGCTCATCGAGGTATCGTGCTCTGAAGAAGACACAGGCAAGGTAATTGGTAAGCGCGGGCGAACCATTAAGGCAATTCGTACCCTTGCGCGCGCCTTGGGTCAGCGTGTTGGCACATCGGTTGAGGTAGAAGTTCTAGGTTAG
PROTEIN sequence
Length: 103
MSFDAEEEYTLTADEGSASEGLPSDQVADLVEYVVCGLVDDVNSVSLDVTDSDDGTLIEVSCSEEDTGKVIGKRGRTIKAIRTLARALGQRVGTSVEVEVLG*