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NECEvent2014_3_5_scaffold_527_9

Organism: NECEvent2014_3_5_Atopobium_minutum-rel_49_9

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(8533..8874)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S16 n=2 Tax=Atopobium RepID=N2BU45_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 113.0
  • Bit_score: 218
  • Evalue 2.60e-54
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 1006 similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 113.0
  • Bit_score: 217
  • Evalue 8.00e-54
SSU ribosomal protein S16P similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 113.0
  • Bit_score: 176
  • Evalue 4.10e-42

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 342
TTGGCAGTCAAGATTCGTTTGGCCCGTCATGGTGCCAAGAAGCGTCCCTTCTATCGCGTCGTTGTTGCAGATGGCCGTATGCCTCGCGATGGTCGTTACATCGAGTTGGTTGGTCGCTATAACCCCCTTACCACCCCTAAGACCATCGAGATTGATCTCGAGAAGGTAGATGCATGGGTAGCAAAGGGCGCACAACCCACCAATGCCGTTGCTCATCTTATTGATATTGCTCGTGGCGCCGCTCCAGAGCCTTCCAAAAAGGACAAAAAGTCCAAGAAGCAGATTGCAAAGGATGCCGCCGCTGCTGAGGAAGCTGCTGCTGCCGCAGAGTCTGCAGAGTAA
PROTEIN sequence
Length: 114
LAVKIRLARHGAKKRPFYRVVVADGRMPRDGRYIELVGRYNPLTTPKTIEIDLEKVDAWVAKGAQPTNAVAHLIDIARGAAPEPSKKDKKSKKQIAKDAAAAEEAAAAAESAE*