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NECEvent2014_3_5_scaffold_527

Alias: 173_003_scaffold_527

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_5_scaffold_527_1
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(3..2111)
DNA (2109bp) protein (703aa)
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=2 Tax=Atopobium RepID=N2BJS6_9ACTN rbh
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EMZ41977.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063
NECEvent2014_3_5_scaffold_527_2
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(2371..3249)
DNA (879bp) protein (293aa)
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00
Putative pyruvate, phosphate dikinase regulatory protein n=2 Tax=Atopobium RepID=N2BTY1_9ACTN rbh
hypothetical protein
NECEvent2014_3_5_scaffold_527_3
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(3275..5371)
DNA (2097bp) protein (699aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetas
glycyl-tRNA synthetase subunit beta (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit n=2 Tax=Atopobium RepID=N2BYK7_9ACTN rbh
NECEvent2014_3_5_scaffold_527_4
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(5371..6291)
DNA (921bp) protein (307aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA syntheta
glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit n=2 Tax=Atopobium RepID=N2BU41_9ACTN rbh
NECEvent2014_3_5_scaffold_527_5
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6322..6930)
DNA (609bp) protein (203aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopo
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=2 Tax=Atopobium RepID=N2BP57_9ACTN rbh
NECEvent2014_3_5_scaffold_527_6
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6908..7687)
DNA (780bp) protein (260aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (Guanine37-N(1)-) methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=2 Tax=Atopobium RepID=N2BJS9_9ACTN rbh
NECEvent2014_3_5_scaffold_527_7
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7699..8211)
DNA (513bp) protein (171aa)
Ribosome maturation factor RimM n=2 Tax=Atopobium RepID=N2BTY4_9ACTN rbh
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopob
16S rRNA-processing protein
NECEvent2014_3_5_scaffold_527_8
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8222..8530)
DNA (309bp) protein (103aa)
UPF0109 protein HMPREF1091_00958 n=2 Tax=Atopobium RepID=N2BYL2_9ACTN
UPF0109 protein HMPREF1091_00958 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minut
RNA-binding protein
NECEvent2014_3_5_scaffold_527_9
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(8533..8874)
DNA (342bp) protein (114aa)
30S ribosomal protein S16 n=2 Tax=Atopobium RepID=N2BU45_9ACTN
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 1006
SSU ribosomal protein S16P
NECEvent2014_3_5_scaffold_527_10
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9123..9803
DNA (681bp) protein (227aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BP61_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ41986.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
two component transcriptional regulator, winged helix family
NECEvent2014_3_5_scaffold_527_11
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9823..11088
DNA (1266bp) protein (422aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobiu
Uncharacterized protein n=1 Tax=Atopobium minutum 10063974 RepID=N2BJT3_9ACTN rbh
integral membrane sensor signal transduction histidine kinase
NECEvent2014_3_5_scaffold_527_12
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11124..12428
DNA (1305bp) protein (435aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=997872 species="Bacteria; Actinobacteria; Cor
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV n=2 Tax=Atopobium RepID=N2BTY7_9ACTN rbh
NECEvent2014_3_5_scaffold_527_13
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12489..12845)
DNA (357bp) protein (119aa)
Ribosomal silencing factor RsfS n=2 Tax=Atopobium RepID=N2BYL6_9ACTN
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutu
iojap family protein
NECEvent2014_3_5_scaffold_527_14
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12842..13123)
DNA (282bp) protein (94aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BU54_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ41990.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;
metal dependent phosphohydrolase
Displaying 14 items

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