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NECEvent2014_3_5_scaffold_527_12

Organism: NECEvent2014_3_5_Atopobium_minutum-rel_49_9

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 11124..12428

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=997872 species="Bacteria; Actinobacteria; Cor similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 434.0
  • Bit_score: 856
  • Evalue 1.30e-245
DNA-directed DNA polymerase (EC:2.7.7.7) similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 419.0
  • Bit_score: 465
  • Evalue 1.70e-128
DNA polymerase IV n=2 Tax=Atopobium RepID=N2BTY7_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 434.0
  • Bit_score: 856
  • Evalue 9.30e-246
  • rbh

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1305
ATGAGTGATGTTTTTAACATATCTTCTGGTGCTGCACACCGCCCTTGGCAAGGCTGTGCTATTGGCTTGTTAGACCTTGATGCCTTTTTTGCCTCGGTAGAGCAGCTGGATCACCCTCAATGGCGTGGTAAGCCTGTTATTGTGGGTGGTTCTGCCGATAAGCGCGGCGTGGTTTCTACCGCATCCTATGAGGCACGTAAATTTGGTGTGCACTCTGCTATGCCCTCTGCCCAAGCACGTCGTTTATGCCCACAAGCCATTTGGACCTCTGGGCACTTTAGCAGGTACCGTCAGGTAAGCCAGCAAGTTATGGCCTGTATCTTGGATGAAACTCCCTTAATAGAACAGGTCTCTATTGATGAGGCGTTTTTTGACATCACTCCCGGACGCTATTCAAAAGAATCGCCCGAAGCTATTTGCAAACGTATTTCACAGCGCGTCTCACAGCTAGGAGTTACCTGCTCCATTGGCTTGGGTGCCAACAAAACCATTGCCAAGATTGCCTCTGAGCGCAAAAAACCCTGTGGACTGTACTTGGTTTACCCCGAGGATAGCGCTGCGTTTTTAGCTCCTCTACCCGTAGAAGCCATGAGTGGGATTGGTAAAACAGCAGCAGACAAACTACACCACTTAAAAATCTTTACCTTGGGTCAACTGGCCCAAACGGACAAGACCATCATACTAAAAGAATTCGGGAGCTTTGGGCACACCATGCTACTGCGTGCTGCTGGTAAAGAGGTTAGTTCGGTTACACCGTTTGCCCAAAAAGATGAGCCAAAGTCTGTCTCGTCCGAACGTACCTTTGCACAGGATTTACTCTCACCTGTACAGATCTATGCTGCTATAGACCACGTAGCCGAACTTACGGCAGAGCGTCTGCGCGCCAAGCAGTTGGCAGGACATACCATTACGCTCAAAGTAAAGTTTGACTTTGCCCATCAAAAGACGGTGCAAACTCAGCTTTCTTCCACCACAAACAGTCAATCTATATTGGCTGAAACCGCCAAAGAACTCTTGCATAAGATATGGAAAGAGGGCATGCCTATTCGTCTTTTAGGAATAGGAGTAAGTGGCTTTTCTGAAACTGCGCCTGCACAGCTTTCACTTTTTGATTCTTCTGATTCCAAAAAGGGTCAAGTTCAGTCCAACCAAAAAGAAAGTCCCGACAAGCAAAAACTTGCCGAGACATACGATCATCTGCGAAAGCGATTTGGCTCACAGGCGCTCTCTTATGGGCACGATCTACGTTTTGAACGTCATACCACCGATACCAAACCAACGGCTGGTAAGGGCAGCATCTCTTAA
PROTEIN sequence
Length: 435
MSDVFNISSGAAHRPWQGCAIGLLDLDAFFASVEQLDHPQWRGKPVIVGGSADKRGVVSTASYEARKFGVHSAMPSAQARRLCPQAIWTSGHFSRYRQVSQQVMACILDETPLIEQVSIDEAFFDITPGRYSKESPEAICKRISQRVSQLGVTCSIGLGANKTIAKIASERKKPCGLYLVYPEDSAAFLAPLPVEAMSGIGKTAADKLHHLKIFTLGQLAQTDKTIILKEFGSFGHTMLLRAAGKEVSSVTPFAQKDEPKSVSSERTFAQDLLSPVQIYAAIDHVAELTAERLRAKQLAGHTITLKVKFDFAHQKTVQTQLSSTTNSQSILAETAKELLHKIWKEGMPIRLLGIGVSGFSETAPAQLSLFDSSDSKKGQVQSNQKESPDKQKLAETYDHLRKRFGSQALSYGHDLRFERHTTDTKPTAGKGSIS*