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NECEvent2014_3_5_scaffold_527_13

Organism: NECEvent2014_3_5_Atopobium_minutum-rel_49_9

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(12489..12845)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal silencing factor RsfS n=2 Tax=Atopobium RepID=N2BYL6_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 232
  • Evalue 1.80e-58
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutu similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 118.0
  • Bit_score: 232
  • Evalue 2.50e-58
iojap family protein similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 115.0
  • Bit_score: 161
  • Evalue 1.40e-37

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Taxonomy

Atopobium minutum → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 357
ATGAGCGTTACCCCACTAGAGCTAGCAAAAGTTGCAGCAGCCGCTGCAAACGAGAAAAAAGTCGAGGATATGGTGCTTATTGATGTCTCCGAAACCTCAGACATCTGTGATTACTTTTTGATTTGCACCGCTGCCAATAGTCGCCTTGCGGATTCCGTCATTGATGAGGTGGAAGAAAAAGTCGGCATTAATTGTGCGCAAAAGCCTCTTTCCATTGAGGGTAGGGAAGATAAAACCTGGATTTTGATGGATTATGGTGCTGTTTTGGTTAACGTGTTCTTACCGGAGCAGCGTGATTTTTATCGCTTGGATAAACTGTGGGGAGATGCCCCACGGGTAGAGCTTAGGTTTGACTAA
PROTEIN sequence
Length: 119
MSVTPLELAKVAAAAANEKKVEDMVLIDVSETSDICDYFLICTAANSRLADSVIDEVEEKVGINCAQKPLSIEGREDKTWILMDYGAVLVNVFLPEQRDFYRLDKLWGDAPRVELRFD*