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NECEvent2014_3_6_scaffold_110

Alias: 173_004_scaffold_110

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_6_scaffold_110_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..409
DNA (408bp) protein (136aa)
Glutamine synthetase n=18 Tax=Pseudomonas aeruginosa RepID=S0IM32_PSEAI
glutamine synthetase
Glutamine synthetase {ECO:0000313|EMBL:EZO88360.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugino
NECEvent2014_3_6_scaffold_110_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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566..1936
DNA (1371bp) protein (457aa)
Putrescine importer PuuP n=38 Tax=Pseudomonas aeruginosa RepID=V5SZ83_PSEAI rbh
ycjJ; putative amino acid permease
Putrescine importer PuuP {ECO:0000313|EMBL:ETD47230.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeru
NECEvent2014_3_6_scaffold_110_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2424..3653
DNA (1230bp) protein (410aa)
Serine/threonine transporter SstT n=42 Tax=Pseudomonas RepID=SSTT_PSEAB rbh
ygjU; serine/threonine transporter SstT
Serine/threonine transporter SstT {ECO:0000256|HAMAP-Rule:MF_01582, ECO:0000256|SAAS:SAAS00015301}; Na(+)/serine-threonine symporter {ECO:0000256|HAMAP-Rule:MF_01582}; TaxID=1418240 species="Bacteria;
NECEvent2014_3_6_scaffold_110_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3774..4676
DNA (903bp) protein (301aa)
Pseudouridine synthase n=18 Tax=Pseudomonas aeruginosa RepID=M9S8X7_PSEAI rbh
pseudouridylate synthase
Putative pseudouridylate synthase {ECO:0000313|EMBL:BAQ40284.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
NECEvent2014_3_6_scaffold_110_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4834..6708)
DNA (1875bp) protein (625aa)
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=K1CGZ0_PSEAI rbh
hypothetical protein
Cysteine protease {ECO:0000313|EMBL:ETD47234.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa
NECEvent2014_3_6_scaffold_110_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6883..7143)
DNA (261bp) protein (87aa)
Putative membrane protein insertion efficiency factor n=43 Tax=Pseudomonas aeruginosa RepID=YIDD_PSEAB
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomona
NECEvent2014_3_6_scaffold_110_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7202..8557)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=14 Tax=Pseudomonas aeruginosa RepID=M9S735_PSEAI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB56240.1}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
NECEvent2014_3_6_scaffold_110_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8645..9577)
DNA (933bp) protein (311aa)
AraC family transcriptional regulator n=39 Tax=Pseudomonas RepID=V5SXM6_PSEAI rbh
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:EZO88353.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
NECEvent2014_3_6_scaffold_110_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9859..10032
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa X24509 RepID=U9BY82_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AHW71475.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
Hypothetical protein
NECEvent2014_3_6_scaffold_110_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10159..10455
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa ATCC 25324 RepID=K1D3W0_PSEAI
hypothetical protein
Ntibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:EZO88352.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu
NECEvent2014_3_6_scaffold_110_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10513..12507)
DNA (1995bp) protein (665aa)
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=S0IA98_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:EZO88351.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
hypothetical protein
NECEvent2014_3_6_scaffold_110_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12835..13341
DNA (507bp) protein (169aa)
RNA polymerase sigma factor n=7 Tax=Pseudomonas aeruginosa RepID=K1D7C1_PSEAI rbh
RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000313|EMBL:ETD47240.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas a
NECEvent2014_3_6_scaffold_110_13
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13338..14291
DNA (954bp) protein (318aa)
Transmembrane sensor n=6 Tax=Pseudomonas aeruginosa RepID=K1CS84_PSEAI rbh
Fe2+-dicitrate sensor, membrane protein
Iron dicitrate transporter FecR {ECO:0000313|EMBL:EQL40763.1}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomon
NECEvent2014_3_6_scaffold_110_14
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14329..14799)
DNA (471bp) protein (157aa)
Cyanate hydratase {ECO:0000256|HAMAP-Rule:MF_00535}; Short=Cyanase {ECO:0000256|HAMAP-Rule:MF_00535};; EC=4.2.1.104 {ECO:0000256|HAMAP-Rule:MF_00535};; Cyanate hydrolase {ECO:0000256|HAMAP-Rule:MF_005
Cyanate hydratase n=96 Tax=Pseudomonas RepID=CYNS_PSEA8 rbh
cynS; cyanate hydratase
NECEvent2014_3_6_scaffold_110_15
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14839..15501)
DNA (663bp) protein (221aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae
Carbonic anhydrase n=12 Tax=Pseudomonas aeruginosa RepID=Q02LK1_PSEAB rbh
cynT; carbonate dehydratase
NECEvent2014_3_6_scaffold_110_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15616..16503
DNA (888bp) protein (296aa)
Cyn operon transcriptional activator n=7 Tax=Pseudomonas aeruginosa RepID=Q02LK2_PSEAB rbh
cynR; DNA-binding transcriptional regulator CynR
Cyn operon transcriptional activator {ECO:0000313|EMBL:BAR68164.1}; HTH-type transcriptional regulator CynR {ECO:0000313|EMBL:CEI20442.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EM
NECEvent2014_3_6_scaffold_110_17
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16510..17925)
DNA (1416bp) protein (472aa)
Major facilitator superfamily (MFS) transporter n=5 Tax=Pseudomonas aeruginosa RepID=K1D7B6_PSEAI rbh
major facilitator transporter
Probable major facilitator superfamily (MFS) transporter {ECO:0000313|EMBL:AAG05443.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomo
NECEvent2014_3_6_scaffold_110_18
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18009..18938
DNA (930bp) protein (310aa)
LysR family transcriptional regulator n=81 Tax=Pseudomonas RepID=G4LFG4_PSEAI rbh
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:ETD47012.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
NECEvent2014_3_6_scaffold_110_19
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19200..22157
DNA (2958bp) protein (986aa)
TonB-dependent receptor n=3 Tax=Pseudomonas aeruginosa RepID=S0IKP9_PSEAI rbh
tonB dependent receptor family protein
Putative TonB-dependent receptor {ECO:0000313|EMBL:AHW71465.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomo
NECEvent2014_3_6_scaffold_110_20
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22161..23969
DNA (1809bp) protein (603aa)
Binding protein component of ABC transporter n=5 Tax=Pseudomonas aeruginosa RepID=K1CH14_PSEAI rbh
ABC transporter substrate-binding protein
Putative binding protein component of ABC transporter {ECO:0000313|EMBL:BAQ40267.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;"
NECEvent2014_3_6_scaffold_110_21
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23971..24135
DNA (165bp) protein (55aa)
Microcin C ABC transporter permease YejB n=1 Tax=Pseudomonas aeruginosa VRFPA05 RepID=V4X213_PSEAI
peptide ABC transporter permease
Putative peptide ABC transporter, permease protein {ECO:0000313|EMBL:BAQ40266.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" so
Displaying 21 items

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