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NECEvent2014_4_1_Propionibacterium_acnes-rel_59_5_partial

NECEvent2014_4_1_Propionibacterium_acnes_59_5
In projects: NECEvent2014_4_1

Consensus taxonomy: Propionibacterium acnes  →  Propionibacterium  →  Propionibacteriales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 451-500 of 666 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_1_scaffold_1142 174_001_scaffold_1142
Species: CG_Propioni_01 (50%)
2 1406 bp 62.02 5.97 88.34
NECEvent2014_4_1_scaffold_927 174_001_scaffold_927
Species: CG_Propioni_01 (50%)
2 1730 bp 57.80 5.55 88.27
NECEvent2014_4_1_scaffold_573 174_001_scaffold_573
Species: Propionibacterium acnes (100%)
2 2991 bp 60.95 4.81 88.26
NECEvent2014_4_1_scaffold_1046 174_001_scaffold_1046
Species: Propionibacterium acnes (100%)
2 1520 bp 61.25 5.13 88.22
NECEvent2014_4_1_scaffold_836 174_001_scaffold_836
Species: Propionibacterium acnes (100%)
3 1942 bp 57.05 4.79 88.21
NECEvent2014_4_1_scaffold_637 174_001_scaffold_637
Species: Propionibacterium acnes (83.33%)
6 2558 bp 59.38 4.81 88.19
NECEvent2014_4_1_scaffold_1299 174_001_scaffold_1299
Species: CG_Propioni_01 (100%)
1 1262 bp 57.21 11.17 88.19
NECEvent2014_4_1_scaffold_1359 174_001_scaffold_1359
Species: Corynebacterium tuberculostearicum (50%)
2 1215 bp 55.14 3.46 88.15
NECEvent2014_4_1_scaffold_1419 174_001_scaffold_1419
Species: Corynebacterium pseudogenitalium (100%)
2 1172 bp 57.42 4.61 88.05
NECEvent2014_4_1_scaffold_1145 174_001_scaffold_1145
Species: CG_Propioni_01 (50%)
2 1404 bp 56.98 5.13 88.03
NECEvent2014_4_1_scaffold_1161 174_001_scaffold_1161
Species: Propionibacterium acnes (66.67%)
3 1391 bp 57.30 5.18 87.99
NECEvent2014_4_1_scaffold_1448 174_001_scaffold_1448
Species: Propionibacterium acnes (100%)
2 1157 bp 60.76 5.19 87.90
NECEvent2014_4_1_scaffold_1007 174_001_scaffold_1007
Species: Propionibacterium acnes (100%)
2 1564 bp 58.18 4.12 87.85
NECEvent2014_4_1_scaffold_877 174_001_scaffold_877
Species: Propionibacterium acnes (66.67%)
3 1827 bp 62.01 5.58 87.85
NECEvent2014_4_1_scaffold_1402 174_001_scaffold_1402
Species: Propionibacterium acnes (100%)
2 1182 bp 59.31 6.09 87.56
NECEvent2014_4_1_scaffold_908 174_001_scaffold_908
Species: Propionibacterium acnes (100%)
3 1758 bp 59.33 4.44 87.54
NECEvent2014_4_1_scaffold_1194 174_001_scaffold_1194
Species: Propionibacterium acnes (100%)
1 1361 bp 59.07 3.97 87.51
NECEvent2014_4_1_scaffold_844 174_001_scaffold_844
Species: Propionibacterium acnes (100%)
2 1933 bp 64.10 3.72 87.38
NECEvent2014_4_1_scaffold_1080 174_001_scaffold_1080
Species: CG_Propioni_01 (66.67%)
3 1483 bp 56.78 3.84 87.19
NECEvent2014_4_1_scaffold_1454 174_001_scaffold_1454
Species: Corynebacterium sp. KPL1821 (50%)
2 1154 bp 60.75 3.64 87.09
NECEvent2014_4_1_scaffold_1127 174_001_scaffold_1127
Species: Propionibacterium acnes (75%)
4 1427 bp 61.04 5.89 87.04
NECEvent2014_4_1_scaffold_1543 174_001_scaffold_1543
Species: Propionibacterium acnes (66.67%)
3 1096 bp 56.93 4.65 86.77
NECEvent2014_4_1_scaffold_666 174_001_scaffold_666
Species: Propionibacterium acnes (100%)
3 2400 bp 59.21 6.63 86.75
NECEvent2014_4_1_scaffold_1185 174_001_scaffold_1185
Species: Propionibacterium acnes (100%)
2 1373 bp 60.16 4.15 86.74
NECEvent2014_4_1_scaffold_542 174_001_scaffold_542
Species: Propionibacterium acnes (75%)
4 3398 bp 59.09 4.24 86.52
NECEvent2014_4_1_scaffold_689 174_001_scaffold_689
Species: Propionibacterium acnes (100%)
4 2303 bp 60.66 5.47 86.50
NECEvent2014_4_1_scaffold_953 174_001_scaffold_953
Species: Propionibacterium acnes (100%)
2 1659 bp 61.36 4.34 86.44
NECEvent2014_4_1_scaffold_620 174_001_scaffold_620
Species: Propionibacterium acnes (66.67%)
3 2670 bp 59.78 4.94 86.40
NECEvent2014_4_1_scaffold_1587 174_001_scaffold_1587
Genus: Propionibacterium (66.67%)
3 1070 bp 58.50 3.93 86.36
NECEvent2014_4_1_scaffold_1603 174_001_scaffold_1603
Species: Propionibacterium acnes (100%)
2 1060 bp 58.49 5.52 86.32
NECEvent2014_4_1_scaffold_957 174_001_scaffold_957 3 1648 bp 54.00 7.28 86.23
NECEvent2014_4_1_scaffold_1079 174_001_scaffold_1079
Species: Propionibacterium acnes (50%)
2 1484 bp 59.84 4.85 86.12
NECEvent2014_4_1_scaffold_876 174_001_scaffold_876
Species: Propionibacterium acnes (100%)
3 1831 bp 60.46 5.73 86.02
NECEvent2014_4_1_scaffold_1453 174_001_scaffold_1453
Species: Propionibacterium acnes (100%)
1 1155 bp 62.16 5.19 85.97
NECEvent2014_4_1_scaffold_1426 174_001_scaffold_1426
Species: Propionibacterium acnes (100%)
2 1167 bp 59.38 5.66 85.86
NECEvent2014_4_1_scaffold_766 174_001_scaffold_766
Species: Propionibacterium acnes (100%)
2 2083 bp 59.82 4.46 85.84
NECEvent2014_4_1_scaffold_1339 174_001_scaffold_1339
Species: Corynebacterium minutissimum (100%)
1 1235 bp 49.64 3.89 85.75
NECEvent2014_4_1_scaffold_1236 174_001_scaffold_1236
Species: Propionibacterium acnes (100%)
3 1320 bp 57.80 4.77 85.68
NECEvent2014_4_1_scaffold_1341 174_001_scaffold_1341
Species: Propionibacterium acnes (100%)
2 1235 bp 62.19 5.83 85.51
NECEvent2014_4_1_scaffold_659 174_001_scaffold_659
Species: Propionibacterium acnes (50%)
2 2442 bp 61.83 5.53 85.50
NECEvent2014_4_1_scaffold_969 174_001_scaffold_969
Species: CG_Propioni_01 (100%)
1 1631 bp 60.76 3.68 85.35
NECEvent2014_4_1_scaffold_1683 174_001_scaffold_1683
Species: Propionibacterium acnes (100%)
2 1016 bp 61.71 5.61 85.33
NECEvent2014_4_1_scaffold_1433 174_001_scaffold_1433
Species: Propionibacterium acnes (100%)
2 1165 bp 58.54 4.64 85.24
NECEvent2014_4_1_scaffold_1666 174_001_scaffold_1666
Species: Propionibacterium acnes (100%)
2 1027 bp 60.27 4.09 85.00
NECEvent2014_4_1_scaffold_1175 174_001_scaffold_1175
Species: Propionibacterium acnes (50%)
2 1383 bp 60.01 6.07 84.96
NECEvent2014_4_1_scaffold_773 174_001_scaffold_773
Species: Propionibacterium acnes (100%)
2 2067 bp 61.93 3.92 84.91
NECEvent2014_4_1_scaffold_1181 174_001_scaffold_1181
Species: Propionibacterium acnes (50%)
2 1376 bp 60.03 4.14 84.81
NECEvent2014_4_1_scaffold_987 174_001_scaffold_987
Species: Propionibacterium acnes (100%)
3 1601 bp 60.71 5.25 84.70
NECEvent2014_4_1_scaffold_1601 174_001_scaffold_1601
Species: Propionibacterium sp. KPL1847 (50%)
2 1061 bp 63.34 4.52 84.54
NECEvent2014_4_1_scaffold_1413 174_001_scaffold_1413
Species: Propionibacterium acnes (100%)
3 1176 bp 57.57 7.65 84.44
Displaying items 451-500 of 666 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.