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NECEvent2014_4_1_Propionibacterium_acnes-rel_59_5_partial

NECEvent2014_4_1_Propionibacterium_acnes_59_5
In projects: NECEvent2014_4_1

Consensus taxonomy: Propionibacterium acnes  →  Propionibacterium  →  Propionibacteriales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 501-550 of 666 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_1_scaffold_1086 174_001_scaffold_1086
Species: Propionibacterium acnes (100%)
2 1471 bp 58.60 4.28 84.43
NECEvent2014_4_1_scaffold_1317 174_001_scaffold_1317
Species: CG_Propioni_01 (50%)
2 1251 bp 58.11 4.32 84.41
NECEvent2014_4_1_scaffold_501 174_001_scaffold_501
Species: Propionibacterium acnes (57.14%)
7 3966 bp 47.18 5.60 84.34
NECEvent2014_4_1_scaffold_633 174_001_scaffold_633
Species: Propionibacterium acnes (75%)
4 2597 bp 54.06 6.06 84.33
NECEvent2014_4_1_scaffold_1263 174_001_scaffold_1263
Species: CG_Propioni_01 (50%)
2 1295 bp 57.92 5.79 84.32
NECEvent2014_4_1_scaffold_1609 174_001_scaffold_1609
Species: Propionibacterium acnes (100%)
2 1057 bp 62.72 5.39 84.30
NECEvent2014_4_1_scaffold_643 174_001_scaffold_643
Species: Propionibacterium acnes (100%)
3 2521 bp 60.49 5.95 84.25
NECEvent2014_4_1_scaffold_1273 174_001_scaffold_1273
Species: Corynebacterium tuberculostearicum (100%)
2 1287 bp 55.48 4.20 84.15
NECEvent2014_4_1_scaffold_632 174_001_scaffold_632
Species: Propionibacterium acnes (100%)
2 2610 bp 55.17 5.29 84.02
NECEvent2014_4_1_scaffold_1063 174_001_scaffold_1063
Species: Propionibacterium acnes (100%)
2 1501 bp 59.03 5.20 83.94
NECEvent2014_4_1_scaffold_1176 174_001_scaffold_1176
Species: Propionibacterium acnes (100%)
2 1382 bp 57.09 5.86 83.79
NECEvent2014_4_1_scaffold_1446 174_001_scaffold_1446
Species: Propionibacterium acnes (100%)
2 1157 bp 60.59 6.87 83.75
NECEvent2014_4_1_scaffold_825 174_001_scaffold_825
Species: Propionibacterium acnes (100%)
1 1967 bp 61.51 5.72 83.73
NECEvent2014_4_1_scaffold_1583 174_001_scaffold_1583
Species: Propionibacterium acnes (100%)
2 1075 bp 59.63 4.74 83.72
NECEvent2014_4_1_scaffold_1360 174_001_scaffold_1360
Species: Propionibacterium acnes (100%)
2 1215 bp 60.58 5.93 83.70
NECEvent2014_4_1_scaffold_713 174_001_scaffold_713
Species: Propionibacterium acnes (100%)
3 2211 bp 59.88 5.16 83.58
NECEvent2014_4_1_scaffold_1189 174_001_scaffold_1189
Species: Propionibacterium acnes (100%)
2 1366 bp 54.39 4.94 83.46
NECEvent2014_4_1_scaffold_1495 174_001_scaffold_1495
Species: Propionibacterium acnes (100%)
2 1126 bp 58.70 5.33 83.39
NECEvent2014_4_1_scaffold_1198 174_001_scaffold_1198
Species: Propionibacterium acnes (100%)
2 1359 bp 60.78 4.64 83.22
NECEvent2014_4_1_scaffold_1535 174_001_scaffold_1535
Species: Corynebacterium sp. KPL1821 (100%)
2 1100 bp 59.55 2.73 83.18
NECEvent2014_4_1_scaffold_1358 174_001_scaffold_1358
Species: Propionibacterium acnes (66.67%)
3 1216 bp 58.47 4.93 83.14
NECEvent2014_4_1_scaffold_926 174_001_scaffold_926
Species: Propionibacterium acnes (100%)
2 1732 bp 62.07 4.68 83.14
NECEvent2014_4_1_scaffold_1697 174_001_scaffold_1697
Genus: Corynebacterium (100%)
3 1011 bp 58.75 3.26 83.09
NECEvent2014_4_1_scaffold_888 174_001_scaffold_888
Species: Propionibacterium acnes (66.67%)
3 1797 bp 55.82 5.84 82.97
NECEvent2014_4_1_scaffold_1108 174_001_scaffold_1108
Species: CG_Propioni_01 (50%)
2 1450 bp 57.93 5.38 82.97
NECEvent2014_4_1_scaffold_1422 174_001_scaffold_1422
Species: Propionibacterium acnes (100%)
1 1170 bp 58.72 5.90 82.82
NECEvent2014_4_1_scaffold_1458 174_001_scaffold_1458
Species: Propionibacterium sp. KPL1849 (50%)
2 1152 bp 61.72 5.73 82.81
NECEvent2014_4_1_scaffold_1260 174_001_scaffold_1260
Species: Propionibacterium acnes (100%)
1 1301 bp 62.80 4.15 82.55
NECEvent2014_4_1_scaffold_1545 174_001_scaffold_1545
Species: Propionibacterium acnes (100%)
2 1094 bp 57.31 5.76 82.54
NECEvent2014_4_1_scaffold_726 174_001_scaffold_726
Species: Propionibacterium acnes (100%)
1 2193 bp 56.00 5.75 82.49
NECEvent2014_4_1_scaffold_1264 174_001_scaffold_1264
Species: Propionibacterium acnes (100%)
2 1295 bp 60.93 4.86 82.47
NECEvent2014_4_1_scaffold_847 174_001_scaffold_847
Species: Propionibacterium acnes (100%)
3 1927 bp 58.54 3.89 82.36
NECEvent2014_4_1_scaffold_1038 174_001_scaffold_1038
Species: Propionibacterium acnes (100%)
2 1530 bp 59.74 5.69 82.35
NECEvent2014_4_1_scaffold_1477 174_001_scaffold_1477
Species: Corynebacterium sp. KPL1821 (50%)
2 1140 bp 56.32 2.89 81.84
NECEvent2014_4_1_scaffold_576 174_001_scaffold_576
Species: Propionibacterium acnes (66.67%)
3 2962 bp 59.96 4.25 81.53
NECEvent2014_4_1_scaffold_889 174_001_scaffold_889
Species: Propionibacterium acnes (100%)
2 1797 bp 63.66 4.34 81.47
NECEvent2014_4_1_scaffold_1434 174_001_scaffold_1434
Species: Propionibacterium sp. KPL1847 (50%)
2 1164 bp 51.89 6.96 81.44
NECEvent2014_4_1_scaffold_574 174_001_scaffold_574
Species: Propionibacterium acnes (100%)
3 2971 bp 59.58 5.76 81.39
NECEvent2014_4_1_scaffold_1591 174_001_scaffold_1591
Species: Propionibacterium acnes (100%)
2 1067 bp 58.58 4.78 81.26
NECEvent2014_4_1_scaffold_1265 174_001_scaffold_1265
Species: CG_Propioni_01 (50%)
2 1294 bp 58.96 6.26 81.14
NECEvent2014_4_1_scaffold_1534 174_001_scaffold_1534
Species: Corynebacterium striatum (50%)
2 1100 bp 50.82 5.18 81.00
NECEvent2014_4_1_scaffold_816 174_001_scaffold_816
Species: Propionibacterium acnes (100%)
2 1991 bp 58.01 6.18 80.76
NECEvent2014_4_1_scaffold_636 174_001_scaffold_636
Species: Propionibacterium acnes (100%)
2 2567 bp 61.82 4.67 80.64
NECEvent2014_4_1_scaffold_745 174_001_scaffold_745
Genus: Propionibacterium (100%)
3 2132 bp 59.05 4.22 80.63
NECEvent2014_4_1_scaffold_1186 174_001_scaffold_1186
Species: Propionibacterium acnes (100%)
2 1370 bp 58.83 4.93 80.58
NECEvent2014_4_1_scaffold_1581 174_001_scaffold_1581
Species: CG_Propioni_01 (100%)
2 1077 bp 58.77 4.46 80.50
NECEvent2014_4_1_scaffold_1076 174_001_scaffold_1076
Species: CG_Propioni_01 (50%)
2 1486 bp 63.86 5.15 80.35
NECEvent2014_4_1_scaffold_1177 174_001_scaffold_1177
Species: Propionibacterium acnes (100%)
2 1382 bp 60.93 7.16 80.32
NECEvent2014_4_1_scaffold_902 174_001_scaffold_902
Species: Propionibacterium acnes (100%)
3 1767 bp 55.12 5.77 80.14
NECEvent2014_4_1_scaffold_1205 174_001_scaffold_1205
Species: Propionibacterium acnes (100%)
1 1348 bp 51.93 4.01 80.12
Displaying items 501-550 of 666 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.