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NECEvent2014_4_1_Propionibacterium_acnes-rel_59_5_partial

NECEvent2014_4_1_Propionibacterium_acnes_59_5
In projects: NECEvent2014_4_1

Consensus taxonomy: Propionibacterium acnes  →  Propionibacterium  →  Propionibacteriales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 551-600 of 666 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_1_scaffold_1625 174_001_scaffold_1625
Species: Propionibacterium acnes (100%)
2 1046 bp 55.83 4.16 79.73
NECEvent2014_4_1_scaffold_1691 174_001_scaffold_1691
Species: CG_Propioni_01 (66.67%)
3 1013 bp 62.29 5.63 79.66
NECEvent2014_4_1_scaffold_990 174_001_scaffold_990
Species: CG_Propioni_01 (100%)
1 1595 bp 59.06 4.51 79.56
NECEvent2014_4_1_scaffold_978 174_001_scaffold_978
Species: Propionibacterium acnes (75%)
4 1619 bp 59.30 5.00 79.49
NECEvent2014_4_1_scaffold_1202 174_001_scaffold_1202
Species: Propionibacterium acnes (100%)
1 1352 bp 55.33 7.54 79.44
NECEvent2014_4_1_scaffold_630 174_001_scaffold_630
Species: Propionibacterium acnes (100%)
4 2626 bp 50.76 7.71 79.40
NECEvent2014_4_1_scaffold_1672 174_001_scaffold_1672
Species: Propionibacterium acnes (100%)
2 1025 bp 53.17 4.39 79.32
NECEvent2014_4_1_scaffold_1120 174_001_scaffold_1120
Species: Propionibacterium acnes (100%)
3 1438 bp 60.01 5.63 79.28
NECEvent2014_4_1_scaffold_921 174_001_scaffold_921
Species: Propionibacterium acnes (100%)
2 1743 bp 62.36 5.85 79.00
NECEvent2014_4_1_scaffold_679 174_001_scaffold_679
Species: Propionibacterium acnes (100%)
4 2326 bp 59.89 5.80 78.93
NECEvent2014_4_1_scaffold_1164 174_001_scaffold_1164
Species: Propionibacterium acnes (100%)
3 1389 bp 60.55 5.62 78.83
NECEvent2014_4_1_scaffold_1125 174_001_scaffold_1125
Species: CG_Propioni_01 (50%)
2 1430 bp 58.46 5.24 78.67
NECEvent2014_4_1_scaffold_1014 174_001_scaffold_1014
Species: Propionibacterium acnes (100%)
3 1557 bp 57.80 6.74 78.61
NECEvent2014_4_1_scaffold_1502 174_001_scaffold_1502
Species: Propionibacterium acnes (100%)
3 1119 bp 59.52 4.83 78.55
NECEvent2014_4_1_scaffold_662 174_001_scaffold_662
Species: Propionibacterium acnes (66.67%)
3 2417 bp 56.97 4.59 78.20
NECEvent2014_4_1_scaffold_1706 174_001_scaffold_1706
Species: Propionibacterium acnes (50%)
2 1006 bp 60.24 4.47 78.13
NECEvent2014_4_1_scaffold_1457 174_001_scaffold_1457
Species: Propionibacterium acnes (100%)
2 1152 bp 58.51 4.43 77.86
NECEvent2014_4_1_scaffold_731 174_001_scaffold_731
Species: Propionibacterium acnes (100%)
3 2177 bp 58.34 5.93 77.58
NECEvent2014_4_1_scaffold_887 174_001_scaffold_887
Species: Propionibacterium acnes (66.67%)
3 1801 bp 59.97 4.00 77.46
NECEvent2014_4_1_scaffold_1058 174_001_scaffold_1058
Species: Propionibacterium acnes (50%)
2 1506 bp 63.15 4.58 77.29
NECEvent2014_4_1_scaffold_681 174_001_scaffold_681
Species: CG_Propioni_01 (100%)
2 2322 bp 58.18 5.94 76.87
NECEvent2014_4_1_scaffold_1370 174_001_scaffold_1370
Species: Propionibacterium acnes (50%)
2 1208 bp 58.94 5.96 76.74
NECEvent2014_4_1_scaffold_801 174_001_scaffold_801
Species: Propionibacterium acnes (100%)
2 2021 bp 59.03 5.94 76.60
NECEvent2014_4_1_scaffold_771 174_001_scaffold_771
Species: Propionibacterium acnes (100%)
3 2068 bp 51.02 6.24 76.45
NECEvent2014_4_1_scaffold_905 174_001_scaffold_905
Species: Propionibacterium acnes (66.67%)
3 1760 bp 59.72 5.54 76.36
NECEvent2014_4_1_scaffold_930 174_001_scaffold_930
Species: Propionibacterium acnes (66.67%)
3 1717 bp 58.53 5.42 76.00
NECEvent2014_4_1_scaffold_1354 174_001_scaffold_1354
Species: Propionibacterium acnes (100%)
2 1221 bp 62.24 3.93 75.68
NECEvent2014_4_1_scaffold_1472 174_001_scaffold_1472
Species: Propionibacterium acnes (100%)
2 1144 bp 55.51 5.51 75.52
NECEvent2014_4_1_scaffold_1595 174_001_scaffold_1595
Species: Propionibacterium acnes (100%)
2 1064 bp 57.05 5.64 75.28
NECEvent2014_4_1_scaffold_695 174_001_scaffold_695
Species: Propionibacterium acnes (66.67%)
3 2273 bp 53.54 3.83 75.23
NECEvent2014_4_1_scaffold_1648 174_001_scaffold_1648
Species: Propionibacterium acnes (75%)
4 1038 bp 55.01 6.94 75.14
NECEvent2014_4_1_scaffold_524 174_001_scaffold_524
Species: Propionibacterium acnes (100%)
1 3664 bp 58.00 5.08 75.08
NECEvent2014_4_1_scaffold_1515 174_001_scaffold_1515
Species: Propionibacterium acnes (100%)
1 1112 bp 59.26 5.40 75.00
NECEvent2014_4_1_scaffold_852 174_001_scaffold_852
Species: Propionibacterium acnes (100%)
2 1913 bp 59.44 5.33 74.65
NECEvent2014_4_1_scaffold_1167 174_001_scaffold_1167
Species: Propionibacterium acnes (100%)
2 1388 bp 56.56 4.11 74.57
NECEvent2014_4_1_scaffold_1248 174_001_scaffold_1248
Species: Propionibacterium acnes (100%)
1 1306 bp 60.72 4.48 74.20
NECEvent2014_4_1_scaffold_800 174_001_scaffold_800
Species: Propionibacterium acnes (100%)
2 2023 bp 58.97 5.19 73.85
NECEvent2014_4_1_scaffold_1642 174_001_scaffold_1642
Species: Corynebacterium pseudogenitalium (100%)
1 1041 bp 55.04 4.90 73.78
NECEvent2014_4_1_scaffold_1328 174_001_scaffold_1328
Species: Propionibacterium acnes (100%)
3 1241 bp 62.29 4.35 73.73
NECEvent2014_4_1_scaffold_1193 174_001_scaffold_1193
Species: CG_Propioni_01 (50%)
2 1365 bp 61.03 7.25 73.63
NECEvent2014_4_1_scaffold_733 174_001_scaffold_733
Species: Propionibacterium acnes (100%)
2 2165 bp 60.42 5.40 73.58
NECEvent2014_4_1_scaffold_1618 174_001_scaffold_1618
Species: Corynebacterium tuberculostearicum (100%)
2 1050 bp 53.52 2.86 73.43
NECEvent2014_4_1_scaffold_933 174_001_scaffold_933
Species: Propionibacterium acnes (100%)
2 1713 bp 60.60 4.64 73.38
NECEvent2014_4_1_scaffold_1311 174_001_scaffold_1311
Species: Propionibacterium acnes (50%)
2 1255 bp 58.96 5.50 73.31
NECEvent2014_4_1_scaffold_1641 174_001_scaffold_1641
Species: Propionibacterium acnes (100%)
1 1041 bp 64.75 4.61 73.20
NECEvent2014_4_1_scaffold_1574 174_001_scaffold_1574
Species: Propionibacterium acnes (50%)
2 1079 bp 57.83 6.67 73.12
NECEvent2014_4_1_scaffold_1643 174_001_scaffold_1643
Species: Propionibacterium acnes (100%)
2 1040 bp 59.52 5.05 72.98
NECEvent2014_4_1_scaffold_1131 174_001_scaffold_1131
Species: Propionibacterium acnes (100%)
1 1420 bp 58.73 6.87 72.68
NECEvent2014_4_1_scaffold_1466 174_001_scaffold_1466
Species: Propionibacterium acnes (100%)
2 1149 bp 58.57 3.66 72.32
NECEvent2014_4_1_scaffold_1310 174_001_scaffold_1310
Species: Propionibacterium acnes (66.67%)
3 1255 bp 57.61 4.90 72.27
Displaying items 551-600 of 666 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.