ggKbase home page

NECEvent2014_4_3_scaffold_233_1

Organism: NECEvent2014_4_3_Clostridium_perfringens_28_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(18..902)

Top 3 Functional Annotations

Value Algorithm Source
rfbD; dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133) similarity KEGG
DB: KEGG
  • Identity: 98.0
  • Coverage: 294.0
  • Bit_score: 591
  • Evalue 1.10e-166
dTDP-4-dehydrorhamnose reductase n=1 Tax=Clostridium perfringens F262 RepID=H7CT57_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 294.0
  • Bit_score: 594
  • Evalue 5.90e-167
  • rbh
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EIA17859.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F2 similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 294.0
  • Bit_score: 594
  • Evalue 8.20e-167

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 885
ATGAAAATATTAATAACAGGTTCAAATGGACAATTAGGAAATGAACTTCAATCAATAATAAAAAGTGGAAAAGCAGAAATAGGTTCAGTTAGTGAAAATATAAAAAACTCAGAAGTTATTGCTTTAGATGTTGATAAATTAGATATAACTAGCTTAGAAAATGTTAAAAATGTACTTAATGAAGAAAAGCCAGATGTAGTAATAAACTGTGCAGCAGCAACAAATGTTGACGGATGTGAAAGTAATGAAGATTTTTCATTTAAAGTTAATTCCTTAGGAGCAAGAAATTTAGCTATGGTTTGTGAAGAAATTGGAGCTAAATTAGTTCAAGTTTCAACAGATTATGTATTTAGTGGTATTGGTGAAAAACCATTAACTGAGTTTGATTTAACTGCACCTTATAGTGTTTATGGAAAAACAAAACTTTTAGGTGAAAATTATGTTAAAGAGTTTTGTTCAAAATATTATATAGTTAGAACTGCTTGGTTATATGGATATGTGGGACATAACTTTGTTTACACAATGATGAGACTTGGAAAAGAAAAAGAATCATTAAATGTAGTTAATGATCAAAAAGGAAATCCAACTCACGCAAATGATTTAGCATATCATATATTAAAGCTTATAGAAACAGAAGAATACGGAATATACCATTGTACAGGAAAAGGGGAATGTACTTGGTATGATTTTGCTAAAGAAATAATGGAATTAGCTGGTAATAAGTGTATTGTTAATCCATGTACTTCAGAAGAATATAAAACACCAGCTAAAAGACCAGAATATTCATCATTAGATAATATGATGCTTAGATGTACAATTGGTGATGAAATGAGAGATTGGAAGGAAGGTTTAAAAAGCTTTTTTAAAAATCAACAAAAAAATTAA
PROTEIN sequence
Length: 295
MKILITGSNGQLGNELQSIIKSGKAEIGSVSENIKNSEVIALDVDKLDITSLENVKNVLNEEKPDVVINCAAATNVDGCESNEDFSFKVNSLGARNLAMVCEEIGAKLVQVSTDYVFSGIGEKPLTEFDLTAPYSVYGKTKLLGENYVKEFCSKYYIVRTAWLYGYVGHNFVYTMMRLGKEKESLNVVNDQKGNPTHANDLAYHILKLIETEEYGIYHCTGKGECTWYDFAKEIMELAGNKCIVNPCTSEEYKTPAKRPEYSSLDNMMLRCTIGDEMRDWKEGLKSFFKNQQKN*