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NECEvent2014_4_3_scaffold_233

Alias: 174_003_scaffold_233

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_3_scaffold_233_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18..902)
DNA (885bp) protein (295aa)
rfbD; dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Clostridium perfringens F262 RepID=H7CT57_CLOPF rbh
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EIA17859.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F2
NECEvent2014_4_3_scaffold_233_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(916..1485)
DNA (570bp) protein (190aa)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EDT27840.1}; EC=5.1.3.13 {ECO:0000313|EMBL:EDT27840.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=5 Tax=Clostridium perfringens RepID=H7CT56_CLOPF rbh
NECEvent2014_4_3_scaffold_233_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1498..2409)
DNA (912bp) protein (304aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
rfbA; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3X0_CLOPF rbh
NECEvent2014_4_3_scaffold_233_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2460..3371)
DNA (912bp) protein (304aa)
Glycosyl transferase, group 2 family protein n=3 Tax=Clostridium perfringens RepID=H7CT54_CLOPF rbh
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:EIA17856.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pe
glycosyl transferase family protein
NECEvent2014_4_3_scaffold_233_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3372..4034)
DNA (663bp) protein (221aa)
Sugar transferase family protein n=6 Tax=Clostridium perfringens RepID=H7CT53_CLOPF rbh
sugar transferase
Probable undecaprenyl phosphate galactosephosphotransferase {ECO:0000313|EMBL:BAB80320.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
NECEvent2014_4_3_scaffold_233_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4071..4871)
DNA (801bp) protein (267aa)
Phosphatase YidA {ECO:0000313|EMBL:EDT14509.1}; EC=3.1.3.- {ECO:0000313|EMBL:EDT14509.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
HAD family hydrolase n=7 Tax=Clostridium perfringens RepID=H7CT52_CLOPF rbh
HAD family hydrolase
NECEvent2014_4_3_scaffold_233_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5247..5852
DNA (606bp) protein (202aa)
Conserved domain protein n=6 Tax=Clostridium perfringens RepID=Q0TTJ4_CLOP1 rbh
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:EDT14518.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS
NECEvent2014_4_3_scaffold_233_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6066..7661
DNA (1596bp) protein (532aa)
Peptide chain release factor 3 n=10 Tax=Clostridium perfringens RepID=H7CT50_CLOPF rbh
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia;
prfC; peptide chain release factor 3
NECEvent2014_4_3_scaffold_233_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7922..11248
DNA (3327bp) protein (1109aa)
Membrane protein, MmpL family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUT9_CLOPF rbh
hypothetical protein
Membrane protein, MmpL family {ECO:0000313|EMBL:EDT14525.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str
NECEvent2014_4_3_scaffold_233_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11455..12294)
DNA (840bp) protein (280aa)
HAD hydrolase, IIB family n=3 Tax=Clostridium perfringens RepID=Q0TTJ7_CLOP1 rbh
HAD family hydrolase
Uncharacterized protein {ECO:0000313|EMBL:BAB80315.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_4_3_scaffold_233_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12686..12880
DNA (195bp) protein (65aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CT47_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14543.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_4_3_scaffold_233_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12973..14268)
DNA (1296bp) protein (432aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
M18 family aminopeptidase n=3 Tax=Clostridium perfringens RepID=B1RST8_CLOPF rbh
aminopeptidase 2
NECEvent2014_4_3_scaffold_233_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14410..16071)
DNA (1662bp) protein (554aa)
N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BEZ8_CLOPF rbh
N-acetylmuramoyl-L-alanine amidase, family 2 {ECO:0000313|EMBL:EDS81612.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pe
N-acetylmuramoyl-L-alanine amidase
NECEvent2014_4_3_scaffold_233_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16314..17495
DNA (1182bp) protein (394aa)
Cation efflux family protein n=2 Tax=Clostridium perfringens RepID=B1BEZ7_CLOPF rbh
cation efflux family protein
Cation efflux family protein {ECO:0000313|EMBL:EDS81609.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str.
NECEvent2014_4_3_scaffold_233_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17598..19481)
DNA (1884bp) protein (628aa)
Sulfatase domain protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTK2_CLOP1 rbh
Sulfatase domain protein {ECO:0000313|EMBL:EDT14533.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS
sulfatase
Displaying 15 items

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