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NECEvent2014_4_3_scaffold_233_2

Organism: NECEvent2014_4_3_Clostridium_perfringens_28_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(916..1485)

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EDT27840.1}; EC=5.1.3.13 {ECO:0000313|EMBL:EDT27840.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 188.0
  • Bit_score: 388
  • Evalue 4.40e-105
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13) similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 188.0
  • Bit_score: 385
  • Evalue 9.80e-105
dTDP-4-dehydrorhamnose 3,5-epimerase n=5 Tax=Clostridium perfringens RepID=H7CT56_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 188.0
  • Bit_score: 390
  • Evalue 1.10e-105
  • rbh

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 570
GTGAGTAACTTTAAATTTATAGAAACAAAAATAAAAGATTTATATATTATAGAACCTAAAGTTTTTGGAGATGAAAGAGGATATTTCATGGAAACATATAGTCAAAAAGCTTTTGAAGAAGCTGGACTTACTATGAAATTTGTTCAAGATAATGAATCAAAATCTAAAAAAGGTGTTTTAAGAGGATTACATTTCCAAACTAAACATACTCAAGGAAAGCTTGTTAGAGTAACTCAAGGAGAGGTTTGGGATGTAGCTGTAGATTTAAGAAAAGGATCACCTACATTTGGACAATGGGAAGGTGTTCATTTAAGTGCAGAAAATAAAAGACAATTCTATGTTCCAGAAGGATTTGCTCATGGATTTGTAGTTTTATCTGATGAAGCTGTATTTAACTATAAATGTACAGATTTTTATGCTCCAGAATATGACAGTGGACTTCTTTGGAATGATAAAGATGTTAATGTAGAATGGCCTTTAGAAGGAATAGAAGAAATAATCTTATCAGAAAAAGATAAGAAACAAAAAACTTTAAAAGAATTAGATATTCCTTTTATATATGAAGATTAA
PROTEIN sequence
Length: 190
VSNFKFIETKIKDLYIIEPKVFGDERGYFMETYSQKAFEEAGLTMKFVQDNESKSKKGVLRGLHFQTKHTQGKLVRVTQGEVWDVAVDLRKGSPTFGQWEGVHLSAENKRQFYVPEGFAHGFVVLSDEAVFNYKCTDFYAPEYDSGLLWNDKDVNVEWPLEGIEEIILSEKDKKQKTLKELDIPFIYED*