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NECEvent2014_4_5_Clostridium_butyricum_28_20

NECEvent2014_4_5_Clostridium_butyricum_29_21
In projects: NECEvent2014_4_5

Consensus taxonomy: Clostridium butyricum  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 151-200 of 227 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_5_scaffold_402 174_005_scaffold_402
Species: Clostridium butyricum (70%)
20 18802 bp 29.52 19.19 85.60
NECEvent2014_4_5_scaffold_22 174_005_scaffold_22
Species: Clostridium butyricum (57.14%)
63 77137 bp 28.58 19.10 86.76
NECEvent2014_4_5_scaffold_138 174_005_scaffold_138
Species: Clostridium butyricum (58.82%)
51 38295 bp 28.00 19.07 83.02
NECEvent2014_4_5_scaffold_1007 174_005_scaffold_1007
Species: Clostridium butyricum (75%)
8 7592 bp 28.45 19.01 83.18
NECEvent2014_4_5_scaffold_23 174_005_scaffold_23
Species: Clostridium sp. IBUN125C (54.43%)
79 76636 bp 28.20 18.99 83.23
NECEvent2014_4_5_scaffold_988 174_005_scaffold_988
Species: Clostridium sp. IBUN125C (60%)
5 7846 bp 28.74 18.97 92.00
NECEvent2014_4_5_scaffold_64 174_005_scaffold_64
Species: Clostridium butyricum (62.75%)
51 53997 bp 28.62 18.96 86.64
NECEvent2014_4_5_scaffold_1313 174_005_scaffold_1313
Genus: Clostridium (100%)
5 5223 bp 25.48 18.93 89.89
NECEvent2014_4_5_scaffold_1004 174_005_scaffold_1004
Species: Clostridium butyricum (66.67%)
9 7637 bp 28.00 18.89 84.77
NECEvent2014_4_5_scaffold_299 174_005_scaffold_299
Species: Clostridium butyricum (57.89%)
19 23288 bp 27.57 18.85 85.36
NECEvent2014_4_5_scaffold_100 174_005_scaffold_100
Species: Clostridium butyricum (51.11%)
45 45086 bp 28.23 18.85 85.88
NECEvent2014_4_5_scaffold_899 174_005_scaffold_899
Species: Clostridium butyricum (66.67%)
6 8669 bp 27.58 18.69 87.41
NECEvent2014_4_5_scaffold_331 174_005_scaffold_331
Genus: Clostridium (100%)
17 21527 bp 28.21 18.68 87.81
NECEvent2014_4_5_scaffold_213 174_005_scaffold_213
Genus: Clostridium (100%)
26 30590 bp 28.03 18.65 85.07
NECEvent2014_4_5_scaffold_160 174_005_scaffold_160
Genus: Clostridium (97.06%)
34 35475 bp 28.12 18.60 81.85
NECEvent2014_4_5_scaffold_274 174_005_scaffold_274
Genus: Clostridium (91.67%)
24 24831 bp 29.18 18.59 86.83
NECEvent2014_4_5_scaffold_119 174_005_scaffold_119
Genus: Clostridium (100%)
31 40925 bp 29.08 18.57 87.44
NECEvent2014_4_5_scaffold_660 174_005_scaffold_660
Species: Clostridium butyricum (57.14%)
14 11975 bp 26.89 18.55 78.71
NECEvent2014_4_5_scaffold_1107 174_005_scaffold_1107
Species: Clostridium sp. IBUN125C (50%)
6 6574 bp 28.00 18.46 82.46
NECEvent2014_4_5_scaffold_802 174_005_scaffold_802
Genus: Clostridium (100%)
10 9934 bp 29.75 18.35 77.01
NECEvent2014_4_5_scaffold_1413 174_005_scaffold_1413
Genus: Clostridium (80%)
5 4747 bp 27.55 18.26 88.16
NECEvent2014_4_5_scaffold_642 174_005_scaffold_642
Species: Clostridium butyricum (64.29%)
14 12294 bp 28.21 18.23 82.24
NECEvent2014_4_5_scaffold_468 174_005_scaffold_468
Species: Clostridium butyricum (60%)
15 16251 bp 27.45 18.18 71.35
NECEvent2014_4_5_scaffold_223 174_005_scaffold_223
Genus: Clostridium (100%)
28 29188 bp 27.49 18.16 80.29
NECEvent2014_4_5_scaffold_104 174_005_scaffold_104
Species: Clostridium sp. IBUN125C (56.82%)
44 43829 bp 28.32 18.13 84.66
NECEvent2014_4_5_scaffold_247 174_005_scaffold_247
Genus: Clostridium (100%)
28 27025 bp 28.70 18.06 84.11
NECEvent2014_4_5_scaffold_2032 174_005_scaffold_2032
Species: Clostridium butyricum (50%)
4 2851 bp 27.53 18.05 26.62
NECEvent2014_4_5_scaffold_309 174_005_scaffold_309
Species: Clostridium butyricum (75%)
16 22843 bp 26.79 18.04 86.65
NECEvent2014_4_5_scaffold_1410 174_005_scaffold_1410
Species: Clostridium sp. IBUN125C (75%)
4 4765 bp 26.93 18.01 85.62
NECEvent2014_4_5_scaffold_307 174_005_scaffold_307
Species: Clostridium butyricum (52.94%)
17 22935 bp 27.78 17.98 86.92
NECEvent2014_4_5_scaffold_361 174_005_scaffold_361
Species: Clostridium butyricum (70%)
20 20172 bp 28.06 17.97 83.92
NECEvent2014_4_5_scaffold_338 174_005_scaffold_338
Genus: Clostridium (95.24%)
21 21252 bp 27.30 17.91 85.74
NECEvent2014_4_5_scaffold_748 174_005_scaffold_748
Species: Clostridium butyricum (55.56%)
9 10639 bp 28.87 17.86 86.00
NECEvent2014_4_5_scaffold_851 174_005_scaffold_851
Species: Clostridium butyricum (50%)
12 9280 bp 28.18 17.81 86.93
NECEvent2014_4_5_scaffold_237 174_005_scaffold_237
Species: Clostridium butyricum (58.62%)
29 27602 bp 27.66 17.71 82.02
NECEvent2014_4_5_scaffold_420 174_005_scaffold_420
Genus: Clostridium (88.46%)
26 17931 bp 26.37 17.47 75.57
NECEvent2014_4_5_scaffold_725 174_005_scaffold_725
Species: Clostridium butyricum (75%)
12 10968 bp 27.79 17.45 81.13
NECEvent2014_4_5_scaffold_87 174_005_scaffold_87
Genus: Clostridium (85.71%)
42 48351 bp 27.56 17.43 88.52
NECEvent2014_4_5_scaffold_1496 174_005_scaffold_1496
Species: Clostridium butyricum (75%)
4 5178 bp 25.57 17.38 65.35
NECEvent2014_4_5_scaffold_202 174_005_scaffold_202
Species: Clostridium butyricum (51.85%)
27 31647 bp 27.74 17.33 84.54
NECEvent2014_4_5_scaffold_637 174_005_scaffold_637
Genus: Clostridium (100%)
15 12347 bp 27.21 17.31 77.87
NECEvent2014_4_5_scaffold_297 174_005_scaffold_297
Species: Clostridium butyricum (61.9%)
21 23446 bp 27.76 17.25 82.94
NECEvent2014_4_5_scaffold_1484 174_005_scaffold_1484
Species: Clostridium butyricum (75%)
4 4470 bp 29.22 17.18 80.94
NECEvent2014_4_5_scaffold_360 174_005_scaffold_360
Species: Clostridium butyricum (76.47%)
17 20268 bp 29.10 17.16 86.09
NECEvent2014_4_5_scaffold_699 174_005_scaffold_699
Species: Clostridium butyricum (90.91%)
11 11309 bp 26.69 17.14 88.10
NECEvent2014_4_5_scaffold_1136 174_005_scaffold_1136
Species: Clostridium butyricum (50%)
6 6309 bp 26.03 17.12 82.41
NECEvent2014_4_5_scaffold_2314 174_005_scaffold_2314
Species: Clostridium butyricum (100%)
3 2384 bp 25.29 17.11 74.62
NECEvent2014_4_5_scaffold_1678 174_005_scaffold_1678
Species: Clostridium sp. IBUN13A (80%)
5 3794 bp 27.78 17.08 83.82
NECEvent2014_4_5_scaffold_463 174_005_scaffold_463
Species: Clostridium butyricum (50%)
12 16407 bp 27.42 17.08 89.38
NECEvent2014_4_5_scaffold_193 174_005_scaffold_193
Genus: Clostridium (80%)
35 32260 bp 26.26 17.06 83.82
Displaying items 151-200 of 227 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.