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NECEvent2014_4_5_Clostridium_butyricum_28_20

NECEvent2014_4_5_Clostridium_butyricum_29_21
In projects: NECEvent2014_4_5

Consensus taxonomy: Clostridium butyricum  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 51-100 of 227 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_5_scaffold_3932 174_005_scaffold_3932
Species: Clostridium butyricum (50%)
2 1118 bp 25.40 23.35 74.87
NECEvent2014_4_5_scaffold_491 174_005_scaffold_491
Species: Clostridium butyricum (57.14%)
7 15620 bp 28.53 23.35 91.50
NECEvent2014_4_5_scaffold_177 174_005_scaffold_177
Genus: Clostridium (78.13%)
32 33896 bp 28.07 23.28 86.83
NECEvent2014_4_5_scaffold_98 174_005_scaffold_98
Species: Clostridium butyricum (71.79%)
39 45405 bp 29.29 23.24 85.09
NECEvent2014_4_5_scaffold_2804 174_005_scaffold_2804
Species: Clostridium sp. IBUN13A (100%)
1 1810 bp 30.17 23.20 93.31
NECEvent2014_4_5_scaffold_47 174_005_scaffold_47
Genus: Clostridium (94.55%)
55 63667 bp 29.12 23.19 90.57
NECEvent2014_4_5_scaffold_57 174_005_scaffold_57
Species: Clostridium butyricum (55.81%)
43 56054 bp 28.98 22.99 86.84
NECEvent2014_4_5_scaffold_225 174_005_scaffold_225
Genus: Clostridium (88.24%)
34 28940 bp 27.44 22.99 80.61
NECEvent2014_4_5_scaffold_896 174_005_scaffold_896
Species: Clostridium butyricum (75%)
4 8727 bp 29.29 22.98 49.26
NECEvent2014_4_5_scaffold_32 174_005_scaffold_32
Genus: Clostridium (90%)
70 71518 bp 28.55 22.89 85.73
NECEvent2014_4_5_scaffold_545 174_005_scaffold_545
Species: Clostridium butyricum (50%)
8 14220 bp 28.13 22.87 77.28
NECEvent2014_4_5_scaffold_2975 174_005_scaffold_2975
Species: Clostridium butyricum (100%)
3 1648 bp 29.13 22.85 99.94
NECEvent2014_4_5_scaffold_571 174_005_scaffold_571
Species: Clostridium butyricum (66.67%)
18 13556 bp 30.56 22.84 90.91
NECEvent2014_4_5_scaffold_112 174_005_scaffold_112
Genus: Clostridium (95.74%)
47 42180 bp 29.12 22.84 81.13
NECEvent2014_4_5_scaffold_126 174_005_scaffold_126
Species: Clostridium butyricum (60.71%)
28 40135 bp 28.96 22.77 90.42
NECEvent2014_4_5_scaffold_678 174_005_scaffold_678
Species: Clostridium butyricum (50%)
14 11580 bp 29.75 22.56 90.78
NECEvent2014_4_5_scaffold_865 174_005_scaffold_865
Species: Clostridium butyricum (50%)
10 9044 bp 29.43 22.46 85.12
NECEvent2014_4_5_scaffold_380 174_005_scaffold_380
Genus: Clostridium (100%)
18 19476 bp 29.60 22.44 84.06
NECEvent2014_4_5_scaffold_1154 174_005_scaffold_1154
Genus: Clostridium (83.33%)
6 6180 bp 28.62 22.43 89.95
NECEvent2014_4_5_scaffold_569 174_005_scaffold_569
Species: Clostridium butyricum (92.86%)
14 13576 bp 30.10 22.25 94.47
NECEvent2014_4_5_scaffold_975 174_005_scaffold_975
Genus: Clostridium (77.78%)
9 7919 bp 27.78 22.24 68.91
NECEvent2014_4_5_scaffold_739 174_005_scaffold_739
Species: Clostridium butyricum (66.67%)
6 10757 bp 31.17 22.17 89.69
NECEvent2014_4_5_scaffold_101 174_005_scaffold_101
Species: Clostridium butyricum (61.54%)
39 44488 bp 28.74 22.11 85.72
NECEvent2014_4_5_scaffold_224 174_005_scaffold_224
Species: Clostridium butyricum (78.26%)
23 29164 bp 30.63 22.09 92.02
NECEvent2014_4_5_scaffold_335 174_005_scaffold_335
Genus: Clostridium (100%)
17 21364 bp 28.08 22.06 80.90
NECEvent2014_4_5_scaffold_27 174_005_scaffold_27
Species: Clostridium butyricum (59.68%)
62 75043 bp 28.64 21.99 88.46
NECEvent2014_4_5_scaffold_63 174_005_scaffold_63
Species: Clostridium butyricum (57.45%)
47 54014 bp 30.36 21.99 89.07
NECEvent2014_4_5_scaffold_1320 174_005_scaffold_1320
Species: Clostridium butyricum (100%)
10 6730 bp 27.98 21.91 54.03
NECEvent2014_4_5_scaffold_14 174_005_scaffold_14
Species: Clostridium butyricum (61.11%)
90 96032 bp 28.09 21.83 84.44
NECEvent2014_4_5_scaffold_1046 174_005_scaffold_1046
Genus: Clostridium (85.71%)
7 7202 bp 27.46 21.81 81.31
NECEvent2014_4_5_scaffold_145 174_005_scaffold_145
Genus: Clostridium (78.13%)
32 37603 bp 27.59 21.78 84.10
NECEvent2014_4_5_scaffold_248 174_005_scaffold_248
Species: Clostridium sp. IBUN125C (56.25%)
16 26919 bp 29.76 21.71 92.50
NECEvent2014_4_5_scaffold_469 174_005_scaffold_469
Species: Clostridium butyricum (50%)
14 16234 bp 30.06 21.70 88.43
NECEvent2014_4_5_scaffold_1220 174_005_scaffold_1220
Genus: Clostridium (75%)
4 5763 bp 29.15 21.68 66.63
NECEvent2014_4_5_scaffold_1478 174_005_scaffold_1478
Species: Clostridium butyricum (100%)
4 4486 bp 30.38 21.60 92.35
NECEvent2014_4_5_scaffold_1382 174_005_scaffold_1382
Species: Clostridium butyricum (80%)
5 4911 bp 28.67 21.56 80.82
NECEvent2014_4_5_scaffold_291 174_005_scaffold_291
Species: Clostridium sp. IBUN125C (52.63%)
19 24002 bp 28.24 21.49 85.04
NECEvent2014_4_5_scaffold_325 174_005_scaffold_325
Species: Clostridium butyricum (50%)
24 21819 bp 29.28 21.48 82.88
NECEvent2014_4_5_scaffold_590 174_005_scaffold_590
Genus: Clostridium (92.86%)
14 13188 bp 29.93 21.41 89.51
NECEvent2014_4_5_scaffold_355 174_005_scaffold_355
Species: Clostridium butyricum (93.75%)
16 20358 bp 29.53 21.41 88.39
NECEvent2014_4_5_scaffold_285 174_005_scaffold_285
Genus: Clostridium (80.77%)
26 24376 bp 27.90 21.30 75.17
NECEvent2014_4_5_scaffold_528 174_005_scaffold_528
Genus: Clostridium (85.71%)
14 14516 bp 28.27 21.29 86.97
NECEvent2014_4_5_scaffold_763 174_005_scaffold_763
Species: Clostridium butyricum (60%)
10 10518 bp 28.65 21.28 86.39
NECEvent2014_4_5_scaffold_1006 174_005_scaffold_1006
Species: Clostridium butyricum (60%)
5 7592 bp 29.95 21.28 89.86
NECEvent2014_4_5_scaffold_711 174_005_scaffold_711
Species: Clostridium butyricum (50%)
10 11116 bp 28.19 21.24 88.22
NECEvent2014_4_5_scaffold_522 174_005_scaffold_522
Genus: Clostridium (100%)
13 14655 bp 27.38 21.14 88.80
NECEvent2014_4_5_scaffold_118 174_005_scaffold_118
Genus: Clostridium (94.44%)
36 41346 bp 29.46 21.09 87.93
NECEvent2014_4_5_scaffold_636 174_005_scaffold_636
Genus: Clostridium (100%)
11 12418 bp 29.94 20.96 85.30
NECEvent2014_4_5_scaffold_212 174_005_scaffold_212
Species: Clostridium butyricum (52%)
25 30682 bp 28.93 20.88 86.79
NECEvent2014_4_5_scaffold_942 174_005_scaffold_942
Genus: Clostridium (100%)
6 8238 bp 30.93 20.83 83.65
Displaying items 51-100 of 227 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.