ggKbase home page

NECEvent2014_4_5_Clostridium_7_2_43FAA-rel_28_9

NECEvent2014_4_5_Clostridium_29_9
In projects: NECEvent2014_4_5

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 251-300 of 473 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_5_scaffold_1582 174_005_scaffold_1582 8 4053 bp 29.56 8.55 85.29
NECEvent2014_4_5_scaffold_2114 174_005_scaffold_2114
Species: Clostridium sp. 7_2_43FAA (100%)
2 2705 bp 28.95 7.71 85.29
NECEvent2014_4_5_scaffold_3105 174_005_scaffold_3105
Species: Clostridium sartagoforme (100%)
1 1545 bp 30.61 12.62 85.24
NECEvent2014_4_5_scaffold_1260 174_005_scaffold_1260
Species: Clostridium sp. 7_2_43FAA (80%)
5 5561 bp 28.72 9.36 85.24
NECEvent2014_4_5_scaffold_1693 174_005_scaffold_1693
Genus: Clostridium (50%)
4 3750 bp 29.41 13.64 85.20
NECEvent2014_4_5_scaffold_846 174_005_scaffold_846
Species: Clostridium sp. 7_2_43FAA (85.71%)
7 9341 bp 28.80 11.90 85.17
NECEvent2014_4_5_scaffold_2483 174_005_scaffold_2483
Species: Clostridium sp. 7_2_43FAA (100%)
2 2170 bp 35.25 11.82 85.16
NECEvent2014_4_5_scaffold_178 174_005_scaffold_178
Species: Clostridium sp. 7_2_43FAA (68.97%)
29 33603 bp 28.20 9.61 85.09
NECEvent2014_4_5_scaffold_1028 174_005_scaffold_1028
Species: Clostridium butyricum (71.43%)
7 7344 bp 29.45 13.95 85.09
NECEvent2014_4_5_scaffold_298 174_005_scaffold_298
Species: Clostridium sp. 7_2_43FAA (60%)
25 23398 bp 29.80 11.71 85.03
NECEvent2014_4_5_scaffold_976 174_005_scaffold_976
Species: Clostridium butyricum (75%)
8 7917 bp 25.29 13.11 85.03
NECEvent2014_4_5_scaffold_1899 174_005_scaffold_1899
Species: Clostridium sp. 7_2_43FAA (66.67%)
3 3162 bp 30.71 9.58 85.01
NECEvent2014_4_5_scaffold_696 174_005_scaffold_696
Genus: Clostridium (87.5%)
8 11338 bp 27.09 8.55 84.94
NECEvent2014_4_5_scaffold_99 174_005_scaffold_99
Species: Clostridium sp. 7_2_43FAA (51.06%)
47 45382 bp 29.43 10.22 84.93
NECEvent2014_4_5_scaffold_565 174_005_scaffold_565
Genus: Clostridium (92.86%)
14 13726 bp 28.00 9.14 84.87
NECEvent2014_4_5_scaffold_810 174_005_scaffold_810
Genus: Clostridium (88.89%)
9 9806 bp 27.98 8.50 84.81
NECEvent2014_4_5_scaffold_635 174_005_scaffold_635
Order: Clostridiales (75%)
8 12425 bp 26.50 8.54 84.77
NECEvent2014_4_5_scaffold_546 174_005_scaffold_546
Species: Clostridium sp. 7_2_43FAA (76.92%)
13 14180 bp 27.07 7.86 84.65
NECEvent2014_4_5_scaffold_1319 174_005_scaffold_1319
Species: Clostridium sp. 7_2_43FAA (80%)
5 5169 bp 29.00 9.81 84.56
NECEvent2014_4_5_scaffold_3842 174_005_scaffold_3842
Species: Clostridium sartagoforme (50%)
2 1152 bp 29.17 7.03 84.55
NECEvent2014_4_5_scaffold_1441 174_005_scaffold_1441
Genus: Clostridium (100%)
7 4622 bp 27.02 6.78 84.51
NECEvent2014_4_5_scaffold_2059 174_005_scaffold_2059
Species: Clostridium sartagoforme (50%)
4 2794 bp 24.23 6.07 84.50
NECEvent2014_4_5_scaffold_374 174_005_scaffold_374
Species: Clostridium sp. 7_2_43FAA (58.82%)
17 19714 bp 29.07 9.41 84.46
NECEvent2014_4_5_scaffold_1499 174_005_scaffold_1499
Species: Clostridium saccharobutylicum (50%)
4 4405 bp 26.54 7.29 84.38
NECEvent2014_4_5_scaffold_1735 174_005_scaffold_1735
Species: Clostridium sp. 7_2_43FAA (57.14%)
7 3576 bp 23.41 5.16 84.31
NECEvent2014_4_5_scaffold_966 174_005_scaffold_966
Species: Clostridium sp. 7_2_43FAA (90%)
10 8011 bp 29.07 10.09 84.30
NECEvent2014_4_5_scaffold_2289 174_005_scaffold_2289
Species: Clostridium sp. 7_2_43FAA (66.67%)
3 2429 bp 28.45 8.09 84.23
NECEvent2014_4_5_scaffold_641 174_005_scaffold_641
Species: Clostridium sp. 7_2_43FAA (61.54%)
13 12303 bp 27.12 8.40 84.17
NECEvent2014_4_5_scaffold_1435 174_005_scaffold_1435 12 4676 bp 31.44 10.68 84.17
NECEvent2014_4_5_scaffold_603 174_005_scaffold_603
Species: Clostridium sp. 7_2_43FAA (75%)
12 13024 bp 27.18 8.33 84.14
NECEvent2014_4_5_scaffold_1239 174_005_scaffold_1239
Species: Clostridium sp. 7_2_43FAA (60%)
5 5667 bp 27.62 10.06 84.07
NECEvent2014_4_5_scaffold_1807 174_005_scaffold_1807
Species: Clostridium sp. 7_2_43FAA (50%)
2 3394 bp 25.07 6.72 84.06
NECEvent2014_4_5_scaffold_761 174_005_scaffold_761
Genus: Clostridium (66.67%)
9 10543 bp 29.00 8.92 84.06
NECEvent2014_4_5_scaffold_1632 174_005_scaffold_1632
Species: Clostridium sartagoforme (66.67%)
3 3909 bp 29.68 10.17 84.04
NECEvent2014_4_5_scaffold_4030 174_005_scaffold_4030
Species: Clostridium sp. 7_2_43FAA (50%)
2 1083 bp 26.32 7.06 83.93
NECEvent2014_4_5_scaffold_1370 174_005_scaffold_1370
Species: Clostridium sp. 7_2_43FAA (50%)
2 4935 bp 32.06 11.28 83.89
NECEvent2014_4_5_scaffold_1026 174_005_scaffold_1026
Genus: Clostridium (80%)
5 7370 bp 29.74 10.28 83.77
NECEvent2014_4_5_scaffold_927 174_005_scaffold_927
Species: Clostridium sp. 7_2_43FAA (62.5%)
8 8356 bp 29.27 9.44 83.65
NECEvent2014_4_5_scaffold_1361 174_005_scaffold_1361
Species: Clostridium sp. 7_2_43FAA (75%)
8 4991 bp 29.63 9.53 83.61
NECEvent2014_4_5_scaffold_2495 174_005_scaffold_2495
Species: Clostridium sp. 7_2_43FAA (50%)
4 2154 bp 25.44 8.98 83.57
NECEvent2014_4_5_scaffold_369 174_005_scaffold_369
Genus: Clostridium (55.56%)
18 19909 bp 29.16 9.24 83.53
NECEvent2014_4_5_scaffold_542 174_005_scaffold_542
Genus: Clostridium (80%)
15 14245 bp 27.66 9.92 83.46
NECEvent2014_4_5_scaffold_1125 174_005_scaffold_1125
Species: Clostridium sp. 7_2_43FAA (100%)
8 6431 bp 28.55 9.94 83.46
NECEvent2014_4_5_scaffold_1288 174_005_scaffold_1288
Species: Clostridium sp. 7_2_43FAA (60%)
5 5385 bp 27.13 8.19 83.40
NECEvent2014_4_5_scaffold_1224 174_005_scaffold_1224
Species: Clostridium celatum (60%)
5 5757 bp 30.17 9.02 83.38
NECEvent2014_4_5_scaffold_1180 174_005_scaffold_1180
Species: Clostridium sp. 7_2_43FAA (100%)
5 5996 bp 28.09 9.11 83.36
NECEvent2014_4_5_scaffold_1234 174_005_scaffold_1234
Genus: Clostridium (100%)
4 5694 bp 29.14 9.01 83.19
NECEvent2014_4_5_scaffold_818 174_005_scaffold_818
Species: Clostridium sp. 7_2_43FAA (66.67%)
12 9690 bp 28.85 9.15 83.19
NECEvent2014_4_5_scaffold_1471 174_005_scaffold_1471
Genus: Clostridium (100%)
3 4514 bp 28.69 9.47 83.07
NECEvent2014_4_5_scaffold_1027 174_005_scaffold_1027
Species: Clostridium sp. 7_2_43FAA (85.71%)
7 7350 bp 29.18 9.84 83.02
Displaying items 251-300 of 473 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.