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NECEvent2014_4_5_Clostridium_7_2_43FAA-rel_28_9

NECEvent2014_4_5_Clostridium_29_9
In projects: NECEvent2014_4_5

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 301-350 of 473 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_5_scaffold_1858 174_005_scaffold_1858
Species: Clostridium sartagoforme (66.67%)
3 3279 bp 28.48 9.70 82.98
NECEvent2014_4_5_scaffold_813 174_005_scaffold_813
Species: Clostridium sp. 7_2_43FAA (58.33%)
12 9780 bp 28.33 9.05 82.94
NECEvent2014_4_5_scaffold_962 174_005_scaffold_962
Species: Clostridium sp. 7_2_43FAA (77.78%)
9 8062 bp 27.36 6.75 82.91
NECEvent2014_4_5_scaffold_940 174_005_scaffold_940
Species: Clostridium sp. 7_2_43FAA (71.43%)
7 8283 bp 26.38 7.66 82.87
NECEvent2014_4_5_scaffold_1321 174_005_scaffold_1321
Species: Clostridium sp. 7_2_43FAA (60%)
5 5162 bp 28.26 10.64 82.82
NECEvent2014_4_5_scaffold_598 174_005_scaffold_598
Species: Clostridium sp. 7_2_43FAA (71.43%)
14 13134 bp 28.77 8.84 82.78
NECEvent2014_4_5_scaffold_1689 174_005_scaffold_1689
Species: Clostridium botulinum (100%)
2 3758 bp 31.88 11.30 82.70
NECEvent2014_4_5_scaffold_1100 174_005_scaffold_1100
Species: Clostridium sp. 7_2_43FAA (85.71%)
7 6670 bp 27.93 8.79 82.67
NECEvent2014_4_5_scaffold_357 174_005_scaffold_357
Genus: Clostridium (94.74%)
19 20303 bp 28.20 9.80 82.61
NECEvent2014_4_5_scaffold_2246 174_005_scaffold_2246
Species: Clostridium sp. 7_2_43FAA (100%)
3 2495 bp 29.50 7.58 82.61
NECEvent2014_4_5_scaffold_1571 174_005_scaffold_1571
Species: Clostridium sp. 7_2_43FAA (75%)
4 4103 bp 27.20 7.90 82.55
NECEvent2014_4_5_scaffold_2951 174_005_scaffold_2951
Species: Clostridium sartagoforme (50%)
2 1669 bp 26.36 6.56 82.50
NECEvent2014_4_5_scaffold_376 174_005_scaffold_376
Genus: Clostridium (52.38%)
21 19703 bp 27.48 9.23 82.42
NECEvent2014_4_5_scaffold_1398 174_005_scaffold_1398
Species: Clostridium sp. 7_2_43FAA (80%)
5 4820 bp 27.80 6.82 82.34
NECEvent2014_4_5_scaffold_4028 174_005_scaffold_4028
Species: Clostridium sp. 7_2_43FAA (100%)
2 1083 bp 22.44 6.23 82.27
NECEvent2014_4_5_scaffold_3491 174_005_scaffold_3491
Species: Clostridium sartagoforme (100%)
1 1324 bp 30.29 8.84 82.25
NECEvent2014_4_5_scaffold_1483 174_005_scaffold_1483
Species: Clostridium sp. 7_2_43FAA (100%)
4 4476 bp 29.62 10.15 82.24
NECEvent2014_4_5_scaffold_400 174_005_scaffold_400
Genus: Clostridium (83.33%)
18 18854 bp 27.50 8.04 82.22
NECEvent2014_4_5_scaffold_1590 174_005_scaffold_1590
Species: Clostridium sartagoforme (50%)
4 4025 bp 27.18 7.01 82.14
NECEvent2014_4_5_scaffold_1340 174_005_scaffold_1340
Species: Clostridium sp. 7_2_43FAA (87.5%)
8 5102 bp 25.66 7.35 82.09
NECEvent2014_4_5_scaffold_1156 174_005_scaffold_1156
Species: Clostridium sp. 7_2_43FAA (80%)
5 6162 bp 28.45 8.45 82.08
NECEvent2014_4_5_scaffold_1268 174_005_scaffold_1268
Genus: Clostridium (60%)
5 5529 bp 26.24 6.10 82.04
NECEvent2014_4_5_scaffold_842 174_005_scaffold_842
Species: Clostridium sp. 7_2_43FAA (85.71%)
7 9404 bp 29.40 10.03 81.95
NECEvent2014_4_5_scaffold_1190 174_005_scaffold_1190
Genus: Clostridium (88.89%)
9 5954 bp 28.08 8.16 81.93
NECEvent2014_4_5_scaffold_2003 174_005_scaffold_2003
Genus: Clostridium (100%)
5 2901 bp 24.34 7.03 81.90
NECEvent2014_4_5_scaffold_1113 174_005_scaffold_1113
Species: Clostridium sp. 7_2_43FAA (80%)
5 6525 bp 27.83 8.21 81.84
NECEvent2014_4_5_scaffold_738 174_005_scaffold_738
Genus: Clostridium (100%)
10 10760 bp 28.64 8.49 81.83
NECEvent2014_4_5_scaffold_1759 174_005_scaffold_1759
Species: Clostridium sp. 7_2_43FAA (100%)
5 3514 bp 26.61 6.49 81.79
NECEvent2014_4_5_scaffold_1142 174_005_scaffold_1142
Species: Clostridium sartagoforme (71.43%)
7 6277 bp 28.41 9.08 81.73
NECEvent2014_4_5_scaffold_194 174_005_scaffold_194
Genus: Clostridium (83.87%)
31 32232 bp 28.51 8.96 81.66
NECEvent2014_4_5_scaffold_1989 174_005_scaffold_1989
Species: Clostridium sp. 7_2_43FAA (100%)
4 2927 bp 27.02 8.20 81.59
NECEvent2014_4_5_scaffold_1005 174_005_scaffold_1005
Species: Clostridium sartagoforme (55.56%)
9 7594 bp 27.81 9.01 81.50
NECEvent2014_4_5_scaffold_1372 174_005_scaffold_1372
Genus: Clostridium (60%)
5 4931 bp 26.87 7.06 81.40
NECEvent2014_4_5_scaffold_319 174_005_scaffold_319
Genus: Clostridium (80%)
20 22153 bp 28.88 9.84 81.27
NECEvent2014_4_5_scaffold_4064 174_005_scaffold_4064
Species: Clostridium sp. DL-VIII (100%)
1 1071 bp 26.80 7.00 81.23
NECEvent2014_4_5_scaffold_424 174_005_scaffold_424
Genus: Clostridium (64.71%)
17 17752 bp 28.52 9.52 81.19
NECEvent2014_4_5_scaffold_922 174_005_scaffold_922
Genus: Clostridium (71.43%)
7 8415 bp 31.48 11.59 81.14
NECEvent2014_4_5_scaffold_656 174_005_scaffold_656
Species: Clostridium sp. 7_2_43FAA (70%)
10 12006 bp 30.73 10.33 81.01
NECEvent2014_4_5_scaffold_1152 174_005_scaffold_1152
Species: Clostridium sp. 7_2_43FAA (66.67%)
6 6187 bp 29.48 9.82 80.98
NECEvent2014_4_5_scaffold_1391 174_005_scaffold_1391
Species: Clostridium sp. 7_2_43FAA (66.67%)
6 4856 bp 26.94 7.48 80.87
NECEvent2014_4_5_scaffold_773 174_005_scaffold_773
Genus: Clostridium (66.67%)
9 10278 bp 27.73 8.70 80.68
NECEvent2014_4_5_scaffold_480 174_005_scaffold_480
Genus: Clostridium (64.29%)
14 15919 bp 28.07 8.27 80.60
NECEvent2014_4_5_scaffold_470 174_005_scaffold_470
Genus: Clostridium (75%)
16 16193 bp 26.04 7.73 80.53
NECEvent2014_4_5_scaffold_2565 174_005_scaffold_2565
Species: Clostridium sp. 7_2_43FAA (100%)
3 2058 bp 26.04 6.12 80.47
NECEvent2014_4_5_scaffold_167 174_005_scaffold_167
Species: Clostridium sp. 7_2_43FAA (56.67%)
30 34796 bp 29.78 10.70 80.41
NECEvent2014_4_5_scaffold_1298 174_005_scaffold_1298
Genus: Clostridium (55.56%)
9 5328 bp 30.11 10.87 80.39
NECEvent2014_4_5_scaffold_1550 174_005_scaffold_1550
Genus: Clostridium (62.5%)
8 4188 bp 28.65 9.63 80.37
NECEvent2014_4_5_scaffold_616 174_005_scaffold_616
Genus: Clostridium (80%)
15 12721 bp 28.40 10.44 80.09
NECEvent2014_4_5_scaffold_662 174_005_scaffold_662
Species: Clostridium sp. 7_2_43FAA (61.54%)
13 11924 bp 29.21 8.32 79.91
NECEvent2014_4_5_scaffold_2157 174_005_scaffold_2157
Genus: Clostridium (100%)
5 2639 bp 28.23 7.50 79.80
Displaying items 301-350 of 473 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.