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NECEvent2014_4_5_Clostridium_7_2_43FAA-rel_28_9

NECEvent2014_4_5_Clostridium_29_9
In projects: NECEvent2014_4_5

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 351-400 of 473 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_5_scaffold_1063 174_005_scaffold_1063
Species: Clostridium sp. 7_2_43FAA (75%)
8 7014 bp 28.36 10.31 79.77
NECEvent2014_4_5_scaffold_1664 174_005_scaffold_1664
Species: Clostridium sartagoforme (50%)
4 3835 bp 29.31 9.58 79.48
NECEvent2014_4_5_scaffold_1730 174_005_scaffold_1730
Species: Clostridium chauvoei (50%)
4 3610 bp 25.76 6.57 79.45
NECEvent2014_4_5_scaffold_1408 174_005_scaffold_1408
Species: Clostridium sp. 7_2_43FAA (83.33%)
6 4777 bp 27.99 7.85 79.44
NECEvent2014_4_5_scaffold_1591 174_005_scaffold_1591
Species: Clostridium sp. 7_2_43FAA (50%)
4 4022 bp 25.76 6.45 79.44
NECEvent2014_4_5_scaffold_1108 174_005_scaffold_1108
Genus: Clostridium (75%)
4 6569 bp 29.21 8.49 79.42
NECEvent2014_4_5_scaffold_3479 174_005_scaffold_3479
Species: Clostridium sp. 7_2_43FAA (50%)
2 1330 bp 30.15 10.83 79.40
NECEvent2014_4_5_scaffold_3543 174_005_scaffold_3543
Species: Clostridium sp. 7_2_43FAA (50%)
2 1300 bp 28.54 6.12 79.38
NECEvent2014_4_5_scaffold_1199 174_005_scaffold_1199
Species: Clostridium sp. 7_2_43FAA (75%)
4 5907 bp 26.92 7.39 79.33
NECEvent2014_4_5_scaffold_2590 174_005_scaffold_2590
Species: Clostridium sp. 7_2_43FAA (100%)
2 2018 bp 28.69 7.73 79.24
NECEvent2014_4_5_scaffold_1587 174_005_scaffold_1587
Genus: Clostridium (75%)
4 4034 bp 32.13 12.08 79.23
NECEvent2014_4_5_scaffold_1444 174_005_scaffold_1444
Genus: Clostridium (60%)
5 4616 bp 25.63 7.51 78.96
NECEvent2014_4_5_scaffold_3239 174_005_scaffold_3239
Species: Clostridium sartagoforme (50%)
2 1471 bp 25.63 7.75 78.93
NECEvent2014_4_5_scaffold_973 174_005_scaffold_973
Species: Clostridium sp. IBUN125C (50%)
10 7950 bp 27.77 14.40 78.91
NECEvent2014_4_5_scaffold_655 174_005_scaffold_655
Species: Clostridium sp. 7_2_43FAA (63.64%)
11 12064 bp 28.77 8.96 78.88
NECEvent2014_4_5_scaffold_1105 174_005_scaffold_1105
Species: Clostridium sp. 7_2_43FAA (50%)
4 6593 bp 29.53 10.26 78.81
NECEvent2014_4_5_scaffold_1296 174_005_scaffold_1296
Species: Clostridium sp. 7_2_43FAA (83.33%)
6 5344 bp 28.46 9.49 78.71
NECEvent2014_4_5_scaffold_3078 174_005_scaffold_3078
Species: Clostridium sp. IBUN125C (100%)
2 1561 bp 25.75 10.28 78.60
NECEvent2014_4_5_scaffold_2239 174_005_scaffold_2239
Genus: Clostridium (75%)
4 2513 bp 25.15 6.39 78.55
NECEvent2014_4_5_scaffold_1574 174_005_scaffold_1574
Species: Clostridium sp. IBUN125C (60%)
5 4096 bp 26.20 12.16 78.44
NECEvent2014_4_5_scaffold_3334 174_005_scaffold_3334
Species: Clostridium sp. 7_2_43FAA (100%)
2 1410 bp 25.82 7.02 78.30
NECEvent2014_4_5_scaffold_1235 174_005_scaffold_1235
Species: Clostridium sp. 7_2_43FAA (60%)
5 5686 bp 29.05 9.18 78.30
NECEvent2014_4_5_scaffold_1533 174_005_scaffold_1533
Species: Clostridium sartagoforme (80%)
5 4257 bp 31.22 9.87 78.29
NECEvent2014_4_5_scaffold_1636 174_005_scaffold_1636
Species: Clostridium sp. 7_2_43FAA (50%)
6 3890 bp 25.01 6.94 78.28
NECEvent2014_4_5_scaffold_1164 174_005_scaffold_1164
Species: Clostridium sp. 7_2_43FAA (50%)
6 6114 bp 29.52 8.78 78.21
NECEvent2014_4_5_scaffold_919 174_005_scaffold_919
Species: Clostridium sp. 7_2_43FAA (57.14%)
7 8442 bp 28.51 9.52 77.93
NECEvent2014_4_5_scaffold_3069 174_005_scaffold_3069
Species: Clostridium sp. 7_2_43FAA (50%)
2 1571 bp 24.25 5.92 77.91
NECEvent2014_4_5_scaffold_912 174_005_scaffold_912
Genus: Clostridium (54.55%)
11 8565 bp 27.06 8.93 77.79
NECEvent2014_4_5_scaffold_1379 174_005_scaffold_1379
Species: Clostridium sp. 7_2_43FAA (75%)
4 4918 bp 29.81 9.33 77.78
NECEvent2014_4_5_scaffold_821 174_005_scaffold_821
Genus: Clostridium (61.54%)
13 9674 bp 27.19 8.88 77.65
NECEvent2014_4_5_scaffold_2522 174_005_scaffold_2522
Genus: Clostridium (66.67%)
3 2114 bp 28.15 7.24 77.63
NECEvent2014_4_5_scaffold_1626 174_005_scaffold_1626
Species: Clostridium sp. 7_2_43FAA (75%)
4 3940 bp 30.00 10.09 77.59
NECEvent2014_4_5_scaffold_2883 174_005_scaffold_2883
Species: Clostridium sp. 7_2_43FAA (50%)
2 1745 bp 31.40 7.82 77.54
NECEvent2014_4_5_scaffold_3355 174_005_scaffold_3355
Species: Clostridium sartagoforme (100%)
1 1397 bp 28.49 4.94 77.52
NECEvent2014_4_5_scaffold_1790 174_005_scaffold_1790
Genus: Clostridium (100%)
5 3424 bp 25.70 14.19 77.45
NECEvent2014_4_5_scaffold_1887 174_005_scaffold_1887
Species: Clostridium sp. 7_2_43FAA (50%)
4 3192 bp 29.57 9.07 77.44
NECEvent2014_4_5_scaffold_3812 174_005_scaffold_3812
Species: Clostridium sp. IBUN125C (100%)
1 1167 bp 27.68 13.37 77.38
NECEvent2014_4_5_scaffold_1919 174_005_scaffold_1919
Species: Clostridium sp. 7_2_43FAA (50%)
4 3102 bp 31.72 9.09 77.37
NECEvent2014_4_5_scaffold_1984 174_005_scaffold_1984
Species: Clostridium sp. 7_2_43FAA (66.67%)
3 2947 bp 24.97 5.55 77.16
NECEvent2014_4_5_scaffold_1997 174_005_scaffold_1997
Species: Clostridium sp. 7_2_43FAA (100%)
2 2914 bp 26.39 9.78 77.11
NECEvent2014_4_5_scaffold_1576 174_005_scaffold_1576
Species: Clostridium sp. 7_2_43FAA (66.67%)
3 4087 bp 29.92 7.74 77.07
NECEvent2014_4_5_scaffold_1073 174_005_scaffold_1073
Species: Clostridium sp. 7_2_43FAA (80%)
5 6947 bp 29.52 9.03 77.04
NECEvent2014_4_5_scaffold_2039 174_005_scaffold_2039
Species: Clostridium sp. IBUN13A (100%)
1 2832 bp 24.86 13.67 77.01
NECEvent2014_4_5_scaffold_2164 174_005_scaffold_2164
Species: Clostridium sp. 7_2_43FAA (50%)
4 2631 bp 25.58 8.61 76.97
NECEvent2014_4_5_scaffold_1338 174_005_scaffold_1338
Species: Clostridium sp. 7_2_43FAA (66.67%)
6 5107 bp 28.73 9.22 76.84
NECEvent2014_4_5_scaffold_4131 174_005_scaffold_4131
Species: Clostridium sartagoforme (50%)
2 1049 bp 28.41 4.29 76.64
NECEvent2014_4_5_scaffold_1150 174_005_scaffold_1150
Species: Clostridium sartagoforme (66.67%)
6 6194 bp 30.82 9.54 76.62
NECEvent2014_4_5_scaffold_1037 174_005_scaffold_1037
Species: Clostridium butyricum (85.71%)
7 7269 bp 25.60 13.97 76.60
NECEvent2014_4_5_scaffold_2570 174_005_scaffold_2570
Genus: Clostridium (80%)
5 2047 bp 27.60 7.62 76.36
NECEvent2014_4_5_scaffold_3449 174_005_scaffold_3449
Species: Clostridium sp. 7_2_43FAA (50%)
2 1344 bp 31.85 10.04 76.19
Displaying items 351-400 of 473 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.