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NECEvent2014_4_5_Clostridium_7_2_43FAA-rel_28_9

NECEvent2014_4_5_Clostridium_29_9
In projects: NECEvent2014_4_5

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 401-450 of 473 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_5_scaffold_1109 174_005_scaffold_1109
Species: Clostridium sp. 7_2_43FAA (60%)
5 6565 bp 29.43 9.32 75.99
NECEvent2014_4_5_scaffold_1311 174_005_scaffold_1311
Species: Clostridium sp. IBUN125C (50%)
6 5241 bp 25.62 13.05 75.84
NECEvent2014_4_5_scaffold_3307 174_005_scaffold_3307
Species: Clostridium sp. 7_2_43FAA (100%)
2 1428 bp 24.65 4.10 75.84
NECEvent2014_4_5_scaffold_2661 174_005_scaffold_2661
Genus: Clostridium (75%)
4 1949 bp 28.58 9.31 75.73
NECEvent2014_4_5_scaffold_1011 174_005_scaffold_1011
Genus: Clostridium (63.64%)
11 7543 bp 28.29 9.84 75.61
NECEvent2014_4_5_scaffold_2401 174_005_scaffold_2401
Species: Clostridium celatum (66.67%)
3 2284 bp 23.99 6.57 75.53
NECEvent2014_4_5_scaffold_1774 174_005_scaffold_1774
Species: Clostridium sp. IBUN125C (75%)
4 3480 bp 24.20 12.16 75.52
NECEvent2014_4_5_scaffold_2844 174_005_scaffold_2844
Genus: Clostridium (100%)
3 1777 bp 24.87 13.25 75.46
NECEvent2014_4_5_scaffold_2750 174_005_scaffold_2750
Species: Clostridium sp. 7_2_43FAA (100%)
2 1852 bp 24.62 4.62 75.00
NECEvent2014_4_5_scaffold_1358 174_005_scaffold_1358
Genus: Clostridium (50%)
8 5001 bp 27.19 7.98 74.69
NECEvent2014_4_5_scaffold_1211 174_005_scaffold_1211
Genus: Clostridium (55.56%)
9 5842 bp 26.72 6.88 74.51
NECEvent2014_4_5_scaffold_2249 174_005_scaffold_2249
Genus: Clostridium (100%)
5 2486 bp 25.70 13.33 74.46
NECEvent2014_4_5_scaffold_1207 174_005_scaffold_1207
Species: Clostridium sp. 7_2_43FAA (80%)
5 5881 bp 25.59 7.58 74.32
NECEvent2014_4_5_scaffold_2564 174_005_scaffold_2564
Genus: Clostridium (50%)
4 2061 bp 25.72 8.73 74.24
NECEvent2014_4_5_scaffold_2388 174_005_scaffold_2388
Species: Clostridium butyricum (100%)
2 2296 bp 26.09 11.56 74.09
NECEvent2014_4_5_scaffold_737 174_005_scaffold_737
Genus: Clostridium (63.64%)
11 10767 bp 27.65 8.08 74.00
NECEvent2014_4_5_scaffold_1375 174_005_scaffold_1375
Genus: Clostridium (66.67%)
9 4926 bp 27.30 9.50 73.93
NECEvent2014_4_5_scaffold_2150 174_005_scaffold_2150
Species: Clostridium sp. 7_2_43FAA (66.67%)
3 2649 bp 29.37 8.78 73.73
NECEvent2014_4_5_scaffold_4177 174_005_scaffold_4177
Species: Clostridium sp. 7_2_43FAA (100%)
1 1034 bp 23.50 6.24 73.69
NECEvent2014_4_5_scaffold_719 174_005_scaffold_719
Species: Clostridium sp. 7_2_43FAA (70%)
10 11037 bp 28.67 10.06 73.63
NECEvent2014_4_5_scaffold_3818 174_005_scaffold_3818
Species: Clostridium sp. DL-VIII (50%)
2 1164 bp 24.05 5.93 73.45
NECEvent2014_4_5_scaffold_1868 174_005_scaffold_1868
Species: Clostridium sp. 7_2_43FAA (100%)
2 3244 bp 30.89 10.96 73.34
NECEvent2014_4_5_scaffold_1601 174_005_scaffold_1601
Species: Clostridium sp. IBUN125C (66.67%)
3 4007 bp 23.73 14.52 73.30
NECEvent2014_4_5_scaffold_2327 174_005_scaffold_2327
Genus: Clostridium (66.67%)
3 2374 bp 26.12 6.63 73.04
NECEvent2014_4_5_scaffold_2105 174_005_scaffold_2105
Species: Clostridium intestinale (50%)
4 2716 bp 29.71 10.44 72.79
NECEvent2014_4_5_scaffold_1792 174_005_scaffold_1792
Species: Clostridium butyricum (100%)
2 3423 bp 24.74 12.27 72.74
NECEvent2014_4_5_scaffold_2332 174_005_scaffold_2332
Genus: Clostridium (100%)
3 2370 bp 28.90 8.67 72.41
NECEvent2014_4_5_scaffold_2002 174_005_scaffold_2002
Species: Clostridium sp. 7_2_43FAA (75%)
4 2903 bp 26.87 7.44 72.34
NECEvent2014_4_5_scaffold_972 174_005_scaffold_972
Genus: Clostridium (77.78%)
9 7952 bp 26.80 7.92 72.32
NECEvent2014_4_5_scaffold_3965 174_005_scaffold_3965
Species: Clostridium sartagoforme (100%)
1 1104 bp 27.54 5.84 71.74
NECEvent2014_4_5_scaffold_932 174_005_scaffold_932
Genus: Clostridium (58.82%)
17 8335 bp 25.93 6.53 71.59
NECEvent2014_4_5_scaffold_2271 174_005_scaffold_2271
Species: Clostridium celatum (50%)
2 2456 bp 27.24 10.63 71.34
NECEvent2014_4_5_scaffold_3874 174_005_scaffold_3874 5 1140 bp 34.56 7.50 71.32
NECEvent2014_4_5_scaffold_3126 174_005_scaffold_3126
Species: Clostridium sp. 7_2_43FAA (50%)
2 1530 bp 26.54 7.06 70.98
NECEvent2014_4_5_scaffold_1040 174_005_scaffold_1040
Genus: Clostridium (55.56%)
9 7256 bp 25.83 8.72 70.95
NECEvent2014_4_5_scaffold_2044 174_005_scaffold_2044
Species: Clostridium sp. 7_2_43FAA (66.67%)
3 2815 bp 28.95 8.63 70.44
NECEvent2014_4_5_scaffold_2056 174_005_scaffold_2056
Species: Clostridium sp. 7_2_43FAA (100%)
3 2797 bp 27.28 7.99 70.36
NECEvent2014_4_5_scaffold_1263 174_005_scaffold_1263
Species: Clostridium sp. 7_2_43FAA (57.14%)
7 5552 bp 28.91 9.27 70.15
NECEvent2014_4_5_scaffold_1039 174_005_scaffold_1039
Species: Clostridium sp. 7_2_43FAA (100%)
7 7257 bp 27.33 7.81 69.53
NECEvent2014_4_5_scaffold_3911 174_005_scaffold_3911
Species: Clostridium butyricum (100%)
1 1129 bp 21.70 12.89 69.35
NECEvent2014_4_5_scaffold_1960 174_005_scaffold_1960
Species: Clostridium butyricum (60%)
5 2995 bp 25.51 9.52 69.22
NECEvent2014_4_5_scaffold_1647 174_005_scaffold_1647
Species: Clostridium sp. 7_2_43FAA (66.67%)
3 3872 bp 28.87 9.10 69.11
NECEvent2014_4_5_scaffold_3400 174_005_scaffold_3400
Genus: Clostridium (66.67%)
3 1369 bp 25.20 6.25 69.03
NECEvent2014_4_5_scaffold_1777 174_005_scaffold_1777
Genus: Clostridium (57.14%)
7 3471 bp 28.35 7.43 68.94
NECEvent2014_4_5_scaffold_2337 174_005_scaffold_2337
Genus: Clostridium (66.67%)
3 2364 bp 28.05 10.28 68.82
NECEvent2014_4_5_scaffold_1578 174_005_scaffold_1578
Genus: Clostridium (75%)
4 4077 bp 24.70 12.91 68.65
NECEvent2014_4_5_scaffold_1956 174_005_scaffold_1956
Species: Clostridium sp. 7_2_43FAA (75%)
4 3003 bp 29.84 9.14 68.53
NECEvent2014_4_5_scaffold_1776 174_005_scaffold_1776
Genus: Clostridium (80%)
5 3475 bp 28.58 10.75 68.20
NECEvent2014_4_5_scaffold_2429 174_005_scaffold_2429
Species: Jeotgalibacillus sp. D5 (50%)
2 2252 bp 26.91 5.20 67.41
NECEvent2014_4_5_scaffold_3868 174_005_scaffold_3868
Species: Clostridium sp. IBUN13A (100%)
1 1143 bp 24.41 11.15 66.93
Displaying items 401-450 of 473 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.