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NECEvent2014_4_7_scaffold_276

Alias: 174_007_scaffold_276

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_276_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8..1147)
DNA (1140bp) protein (380aa)
Chaperone dnaJ n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8B1_9CLOT rbh
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
dnaJ; chaperone protein DnaJ
NECEvent2014_4_7_scaffold_276_2
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1239..3095)
DNA (1857bp) protein (619aa)
Chaperone protein DnaK n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C9S3_9CLOT rbh
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
dnaK; chaperone protein DnaK
NECEvent2014_4_7_scaffold_276_3
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3154..3807)
DNA (654bp) protein (218aa)
Protein GrpE n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CAR6_9CLOT rbh
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales
grpE family protein
NECEvent2014_4_7_scaffold_276_4
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3824..4855)
DNA (1032bp) protein (344aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFX2_9CLOT rbh
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
hrcA; heat-inducible transcription repressor HrcA
NECEvent2014_4_7_scaffold_276_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5041..6177)
DNA (1137bp) protein (379aa)
hemN; oxygen-independent coproporphyrinogen-III oxidase 1 (EC:1.3.99.22)
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3V4_9CLOT rbh
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EEH98832.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
NECEvent2014_4_7_scaffold_276_6
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6286..6663)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CA08_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR26118.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_4_7_scaffold_276_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6794..7714
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHF3_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98834.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
acyl transferase/acyl hydrolase/lysophospholipase
NECEvent2014_4_7_scaffold_276_8
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7955..8647)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2MYF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK28287.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
NECEvent2014_4_7_scaffold_276_9
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8648..9190)
DNA (543bp) protein (181aa)
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:ERK28248.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ERK28248.1};; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
RNA polymerase factor sigma-70 n=1 Tax=Clostridium intestinale URNW RepID=U2NGL0_9CLOT
RNA polymerase factor sigma-70
NECEvent2014_4_7_scaffold_276_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9345..11153)
DNA (1809bp) protein (603aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
lepA; elongation factor 4 (EC:3.6.5.n1)
Elongation factor 4 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG11_9CLOT rbh
NECEvent2014_4_7_scaffold_276_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11274..11711)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4P0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98836.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_4_7_scaffold_276_12
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11777..12889)
DNA (1113bp) protein (371aa)
Stage II sporulation protein P n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C9W9_9CLOT
Stage II sporulation protein P {ECO:0000313|EMBL:EOR26122.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AA
stage II sporulation protein P
NECEvent2014_4_7_scaffold_276_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12961..13935)
DNA (975bp) protein (325aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-
gpr; germination protease (EC:3.4.99.-) rbh
GPR endopeptidase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8B5_9CLOT rbh
NECEvent2014_4_7_scaffold_276_14
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


14112..14375
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EPX0_9CLOT
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.
rpsT; 30S ribosomal protein S20
NECEvent2014_4_7_scaffold_276_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14485..15516)
DNA (1032bp) protein (344aa)
holA; DNA polymerase III, subunit delta (EC:2.7.7.7)
DNA polymerase III, delta subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG18_9CLOT rbh
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EEH98840.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA
NECEvent2014_4_7_scaffold_276_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15532..17220)
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4P2_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98841.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative competence protein
NECEvent2014_4_7_scaffold_276_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17244..19739)
DNA (2496bp) protein (832aa)
HAD ATPase, P-type, family IC n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3V7_9CLOT rbh
HAD ATPase, P-type, family IC {ECO:0000313|EMBL:EEH98842.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
calcium-transporting ATPase
NECEvent2014_4_7_scaffold_276_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19850..20206)
DNA (357bp) protein (119aa)
Stage V sporulation protein AE n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8B7_9CLOT
Stage V sporulation protein AE {ECO:0000313|EMBL:EEH98843.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
spoVAE; stage V sporulation protein AE
NECEvent2014_4_7_scaffold_276_19
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20222..21241)
DNA (1020bp) protein (340aa)
Stage V sporulation protein AD n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C764_9CLOT
Stage V sporulation protein AD {ECO:0000313|EMBL:EOR24815.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AA
spoVAD; stage V sporulation protein AD
NECEvent2014_4_7_scaffold_276_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21244..21726)
DNA (483bp) protein (161aa)
Stage V sporulation protein AC n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG25_9CLOT
Stage V sporulation protein AC {ECO:0000313|EMBL:EEH98845.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
spoVAC1; stage V sporulation protein AC
NECEvent2014_4_7_scaffold_276_21
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21954..22709)
DNA (756bp) protein (252aa)
RNA polymerase sigma-F factor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4P4_9CLOT rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
sigF; sporulation sigma factor SigF
NECEvent2014_4_7_scaffold_276_22
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22719..23150)
DNA (432bp) protein (144aa)
Anti-sigma F factor {ECO:0000256|HAMAP-Rule:MF_00637}; EC=2.7.11.1 {ECO:0000256|HAMAP-Rule:MF_00637};; Stage II sporulation protein AB {ECO:0000256|HAMAP-Rule:MF_00637}; TaxID=1202534 species="Bacteri
spoIIAB; anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C6B0_9CLOT
NECEvent2014_4_7_scaffold_276_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23164..23544)
DNA (381bp) protein (127aa)
Anti-sigma F factor antagonist n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8B8_9CLOT
Anti-sigma F factor antagonist {ECO:0000256|RuleBase:RU003749}; Stage II sporulation protein {ECO:0000256|RuleBase:RU003749}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
anti-sigma-factor antagonist
Displaying 23 items

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