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NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_22

Organism: NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_plum

partial RP 52 / 55 BSCG 0 / 51 ASCG 12 / 38 MC: 1
Location: 22746..24323

Top 3 Functional Annotations

Value Algorithm Source
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R8J0_CLOSW similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 523.0
  • Bit_score: 566
  • Evalue 2.30e-158
  • rbh
ABC transporter permease {ECO:0000313|EMBL:KGF11991.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 525.0
  • Bit_score: 1002
  • Evalue 3.10e-289
  • rbh
glycine betaine ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 523.0
  • Bit_score: 566
  • Evalue 6.60e-159

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Taxonomy

Clostridiales bacterium S5-A11 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1578
ATGAGCGGTTTTACCTCCTATGTCACCTCCAATTGGCCCTACATTCTTTCTCTTTTGTGGGAGCATATCGAATTAACCGCCATCGCGGTCGCGATCTCGGTCCTCGTGGGCGTGCCGCTCGGAATTTTGATCTCGTACCAACGCAAACTGCAGTCGCCGGTATTACAGTCGGCGAACATCATGCAGGCGATCCCGAGCATGGCGCTGTTGGGCTTCGCGATTCCGTTTTTCGGGATCGGTCGTCTGCCGGCGATTATCGTCGTTATTTTATACTCACTGTTACCGATTATTAAAAACACGTATACGGGCATTTCGCAAATCAGTCCGGAGATGCGTGAAGCGGCGATCGGCATCGGTCTTTCGCGCTGGCAGGTATTACGCAAAGTCGAATTGCCGCAGGCTTTGCCGGTCATCATGGCGGGCGTGCGCATCAGTTCGGTCACCGCGGTCGGTCTGATGACGATCGCGGCCTTCATCGGCGCGGGCGGCTTGGGTGATCTCGTCTTCGCCGGCATTCGCACCGTCGATAACAACATGATTCTCGCGGGCGCGATTCCCGCCTGTATTTTAGCTCTGTCTGTCGATTACATCTTGGGTCGGGTCGAACAACTCGTCACGCCGATCGCCACCCAGCTTTCGCCGACAACGGATCGTCAAGCGGTCATCGGCCGCCACCGTCGATCCAAAATTCTGATCGCGTCGCTGGCGATTTTACTCGTGCTCGGCGGCGGCTACGCCGGCATCCGGCAAGCGTTCGCTCCGAAAGCGGATGTGGTCGTCGGCACGAAAGATTTCACCGAAAATATCCTGATGGGTCACATGATGGCGGAAATCATTGAAGATCATACGGGTCTGAACGTAGAACGACGCATCAATTTAGGCGGCACCAATGTCGCGTTTGAAGCGCTCAAGAGCAAAGAAATCGATCTTTATCTTGATTACACGGGCACGGTCTACGTTTCGCTTTTGAAAAACGAACCGATCAGCGACATGCAGCGGGTGTATGACGAAGGTAAAGCGGGACTGGCGCCGCTTTCCATCACCATGCTGCCGCAATACGCCTTCAATAACACGTACGCGCTCGCCGTGCGTCCGGATTTCGCGGCCGCGCATAACCTGGAAACGATCAGTGATCTGCGCGCCGTCGCGTCGAATATGAATGTCGGCACGACCTTTGAATTTAAAAACCGTCCCGACGGTTTGGACGGCATGACACAAATGTACGGTCTGTCATTCGCTAACGCGCTCGGCATCGACAGCTCCTCGCGTTACATCGCCATTAACAACGATGAAGTCCAGGCGATCGACGCGTTCATGACCGACGGTCTTTTGAAGAAATTCAACCTGAAAGTACTGGAAGACGATCGGCATTACTTCCCGCCGTACTACGCGACGCCGCTTCTGCGTACGGAAGTCGCCGAAGAACATCCGGAAGTGGTGGACGCGCTGAATGAACTCGCGCCGCTCCTGACGGATGAAGTCATGCGTGAATTGAATTATAAAGTGGACGAAGAACGTCAGGATCCGGAAAAAGTGGCTCATGAGTTCCTCGCTTCACAAAACTTGTTGAAAAAGTAA
PROTEIN sequence
Length: 526
MSGFTSYVTSNWPYILSLLWEHIELTAIAVAISVLVGVPLGILISYQRKLQSPVLQSANIMQAIPSMALLGFAIPFFGIGRLPAIIVVILYSLLPIIKNTYTGISQISPEMREAAIGIGLSRWQVLRKVELPQALPVIMAGVRISSVTAVGLMTIAAFIGAGGLGDLVFAGIRTVDNNMILAGAIPACILALSVDYILGRVEQLVTPIATQLSPTTDRQAVIGRHRRSKILIASLAILLVLGGGYAGIRQAFAPKADVVVGTKDFTENILMGHMMAEIIEDHTGLNVERRINLGGTNVAFEALKSKEIDLYLDYTGTVYVSLLKNEPISDMQRVYDEGKAGLAPLSITMLPQYAFNNTYALAVRPDFAAAHNLETISDLRAVASNMNVGTTFEFKNRPDGLDGMTQMYGLSFANALGIDSSSRYIAINNDEVQAIDAFMTDGLLKKFNLKVLEDDRHYFPPYYATPLLRTEVAEEHPEVVDALNELAPLLTDEVMRELNYKVDEERQDPEKVAHEFLASQNLLKK*