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NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_23

Organism: NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_plum

partial RP 52 / 55 BSCG 0 / 51 ASCG 12 / 38 MC: 1
Location: 24618..26201

Top 3 Functional Annotations

Value Algorithm Source
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I166_CLOCE similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 529.0
  • Bit_score: 560
  • Evalue 2.20e-156
  • rbh
ABC transporter permease {ECO:0000313|EMBL:KGF11989.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 527.0
  • Bit_score: 995
  • Evalue 2.90e-287
  • rbh
glycine betaine ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 529.0
  • Bit_score: 560
  • Evalue 6.20e-157

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Taxonomy

Clostridiales bacterium S5-A11 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1584
ATGAATCCTTTTCTGAATTACATCGCCAACGCTTGGCCGCATATCATGGAGCTTCTGTGGGAGCACATCGAGCTGACCGTGATCGCCGTCAGCATTTCGATTTTGATCGGTGTGCCGCTGGGTATTCTGATCGCGAAACGTCGCCCTTTACAAGCGCCGGTATTGCAGACGGCGAACATCATGCAGGCGATTCCGAGCATGGCGCTGTTGGGCTTCGCGATTCCCTTCTTCGGAATCGGTCGCGTGCCGGCGGTACTCGTCGTCATTATTTATTCCCTCTTGCCCATTATCAAAAATACGTACACGGGGCTGACGCAAATTTCTCCCGGCACCAAGGAAGTCGCTGTCGGGATCGGTCTTTCTCCTTGGCAAGTGCTGCGCAAAGTGGAATTTCCGCTGGCGCTGCCGGTCATCATGGCCGGAATCCGTATCAGCGGCGTCACCTCGGTCGGTTTGATGACGATCGCGGCCTTCATCGGCGCGGGCGGCTTGGGTGATCTCGTCTTCGCCGGCATTCGCACCGTCGATAACAATATGATTCTCGCGGGCGCGATCCCCGCCTGCTTGCTGGCGCTCGCCGTGGACTACCTGCTCGGTCTCGTGGAAGAACTCGTTACGCCGATGGCGACCCTGATTACGCCGGAACATACGCGCGCGATGATCAAAAAAGAACGCCGCCGCGCCAAATGGCTGATCGGTCTCGTCACCGCGCTCCTCATCATCGGCGCGGGAACCACCGTCTGGCGCAATTACGCCGAAACGCAAAGCGATATTATCGTCGGCTCGAAAGATTTCACGGAAGGCGTTATCATGGCGCATCTGATGGCCGATATGATCGAAGACCGTACCGATCTGCGCGTCACCCGCCACACGAACCTCGGCGGCACGCAGGTCGCCTATGAAGCGCTGAAAACGGGCAACATCGATCTCTACATGGATTACACCGGCACCGTCTACGTTTCCATATTGCGCCACGAGCCTCTGACCGATGTCGATGAAGTATATCGCCGCAGTCGCGATGAACTCACGGCCATGGGAATCATGATGCTCCCGCAATACGGCTTCGACAATACGTACGCTCTCGCCGTCCGTCAAGACACCGCCGAGCGATACCGCTTGCAAACAATGAGCGATTTGATCGCCGCGGCGCCGCATTTGGTCGTCGGCTCCACGTTCGAATTTACCAATCGCAAAGACGGCCTCCCCGGTCTGACCTCTTACTACGGCATGAATTTCGCGGGCACGACCGGACTGGACGGCTCGTCGCGCTACATCGCCCTGCTCAACGACGACGTGCAGGTCGTCAACGCGTATACCACCGACGGCTTGCTGCGGAAATTCAACTTGGTCATGCTCGCCGATGATCGGCATTACTTCCCGCCGTACTTCGCGACCCCGCTCTTGCGTACGGACGCCGCGGAAAAGCATCCGGAAGTCATCGCCGCTTTGAATGAACTCGGATCGCACATCAATAACAAAGTCGCGCAGGACTTGAACTACAAGGTCGACGAAGAACAACAGGATCCGGCGAAAGTCGCGCGCGAATTTCTAAAGCGCGAAGGACTGCTGCATAAATTGAAATAA
PROTEIN sequence
Length: 528
MNPFLNYIANAWPHIMELLWEHIELTVIAVSISILIGVPLGILIAKRRPLQAPVLQTANIMQAIPSMALLGFAIPFFGIGRVPAVLVVIIYSLLPIIKNTYTGLTQISPGTKEVAVGIGLSPWQVLRKVEFPLALPVIMAGIRISGVTSVGLMTIAAFIGAGGLGDLVFAGIRTVDNNMILAGAIPACLLALAVDYLLGLVEELVTPMATLITPEHTRAMIKKERRRAKWLIGLVTALLIIGAGTTVWRNYAETQSDIIVGSKDFTEGVIMAHLMADMIEDRTDLRVTRHTNLGGTQVAYEALKTGNIDLYMDYTGTVYVSILRHEPLTDVDEVYRRSRDELTAMGIMMLPQYGFDNTYALAVRQDTAERYRLQTMSDLIAAAPHLVVGSTFEFTNRKDGLPGLTSYYGMNFAGTTGLDGSSRYIALLNDDVQVVNAYTTDGLLRKFNLVMLADDRHYFPPYFATPLLRTDAAEKHPEVIAALNELGSHINNKVAQDLNYKVDEEQQDPAKVAREFLKREGLLHKLK*