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NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1

Search features with annotation key words

Displaying items 1-30 of 345 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_1
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(362..1852)
DNA (1491bp) protein (497aa)
Aldehyde dehydrogenase B n=1 Tax=Leptotrichia sp. oral taxon 215 str. W9775 RepID=U2QTX5_9FUSO rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:KGF12007.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium rbh
aldehyde dehydrogenase
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2054..3499)
DNA (1446bp) protein (482aa)
UPI0003D5E858 related cluster n=1 Tax=unknown RepID=UPI0003D5E858 rbh
Amino acid permease family protein {ECO:0000313|EMBL:ETI86887.1}; Flags: Fragment;; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" sour rbh
hypothetical protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_3
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3721..4287
DNA (567bp) protein (189aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; Flags: Fragment;; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillo rbh
UPI0003D66CE0 related cluster n=1 Tax=unknown RepID=UPI0003D66CE0 rbh
signal peptidase I
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_4
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4327..4980)
DNA (654bp) protein (218aa)
UPI0003D6348B related cluster n=1 Tax=unknown RepID=UPI0003D6348B rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF12005.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu rbh
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_5
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4980..5960)
DNA (981bp) protein (327aa)
UPI0003D60614 related cluster n=1 Tax=unknown RepID=UPI0003D60614 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF12004.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu rbh
nitrite and sulfite reductase 4Fe-4S domain-containing protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5977..6540)
DNA (564bp) protein (188aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014 rbh
msrB; methionine-R-sulfoxide reductase (EC:1.8.4.-)
UPI0003D66CE7 related cluster n=1 Tax=unknown RepID=UPI0003D66CE7 rbh
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6617..7786)
DNA (1170bp) protein (390aa)
UPI0003D60AFB related cluster n=1 Tax=unknown RepID=UPI0003D60AFB rbh
Acetyltransferase {ECO:0000313|EMBL:ETI88320.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans rbh
acetyltransferase
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7783..8490)
DNA (708bp) protein (236aa)
UPI0003D5EFD9 related cluster n=1 Tax=unknown RepID=UPI0003D5EFD9 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI88321.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv rbh
hypothetical protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8844..9431
DNA (588bp) protein (196aa)
UPI0003D6646B related cluster n=1 Tax=unknown RepID=UPI0003D6646B rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI88322.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv rbh
Exonuclease RNase T and DNA polymerase III
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9501..10034
DNA (534bp) protein (178aa)
UPI0003D5F92E related cluster n=1 Tax=unknown RepID=UPI0003D5F92E rbh
Methylated-DNA-protein-cysteine S-methyltransferase {ECO:0000313|EMBL:ETI88323.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" sourc rbh
methylated-DNA--protein-cysteine methyltransferase
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_11
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10210..11130)
DNA (921bp) protein (307aa)
UPI0003D62349 related cluster n=1 Tax=unknown RepID=UPI0003D62349 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF12002.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu rbh
LysR family transcriptional regulator
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_12
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11256..11630
DNA (375bp) protein (125aa)
UPI0003D69B9B related cluster n=1 Tax=unknown RepID=UPI0003D69B9B
Uncharacterized protein {ECO:0000313|EMBL:KGF12001.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
LrgA family protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_13
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11627..12316
DNA (690bp) protein (230aa)
UPI0003D5E6ED related cluster n=1 Tax=unknown RepID=UPI0003D5E6ED rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF12000.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu rbh
hypothetical protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_14
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12550..13953
DNA (1404bp) protein (468aa)
UPI0003D62614 related cluster n=1 Tax=unknown RepID=UPI0003D62614 rbh
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KGF11999.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bac rbh
FAD dependent oxidoreductase
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_15
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13946..15238
DNA (1293bp) protein (431aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID rbh
UPI0003D61749 related cluster n=1 Tax=unknown RepID=UPI0003D61749 rbh
adenylosuccinate lyase
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_16
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15257..16543
DNA (1287bp) protein (429aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4. rbh
UPI0003D68B3C related cluster n=1 Tax=unknown RepID=UPI0003D68B3C rbh
adenylosuccinate synthetase
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_17
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17038..18297
DNA (1260bp) protein (420aa)
UPI0003D63B78 related cluster n=1 Tax=unknown RepID=UPI0003D63B78 rbh
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:ETI86301.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus suc rbh
sodium:dicarboxylate symporter
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_18
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18642..18986
DNA (345bp) protein (115aa)
UPI0003D61D0E related cluster n=1 Tax=unknown RepID=UPI0003D61D0E
Arsenical resistance operon repressor {ECO:0000313|EMBL:ETI86302.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoc
ArsR family transcriptional regulator
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_19
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19194..20576
DNA (1383bp) protein (461aa)
UPI0003D678B5 related cluster n=1 Tax=unknown RepID=UPI0003D678B5 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI86303.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv rbh
anaerobic c4-dicarboxylate antiporter, DcuC family
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_20
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20776..21297)
DNA (522bp) protein (174aa)
UPI0003D5F5BB related cluster n=1 Tax=unknown RepID=UPI0003D5F5BB rbh
Proton-coupled thiamine transporter YuaJ {ECO:0000313|EMBL:KGF11993.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clost rbh
yuaJ; YuaJ
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_21
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21550..22749
DNA (1200bp) protein (400aa)
glycine/betaine/L-proline ABC transporter ATPase (EC:3.6.3.25)
UPI0003D63EC3 related cluster n=1 Tax=unknown RepID=UPI0003D63EC3 rbh
ABC transporter ATPase {ECO:0000313|EMBL:KGF11992.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium rbh
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_22
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22746..24323
DNA (1578bp) protein (526aa)
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R8J0_CLOSW rbh
ABC transporter permease {ECO:0000313|EMBL:KGF11991.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteri rbh
glycine betaine ABC transporter substrate-binding protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_23
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24618..26201
DNA (1584bp) protein (528aa)
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I166_CLOCE rbh
ABC transporter permease {ECO:0000313|EMBL:KGF11989.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteri rbh
glycine betaine ABC transporter substrate-binding protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_24
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26288..27247)
DNA (960bp) protein (320aa)
UPI0003D62947 related cluster n=1 Tax=unknown RepID=UPI0003D62947 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI88731.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv rbh
conserved membrane protein of unknown function
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_25
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27308..30970)
DNA (3663bp) protein (1221aa)
UPI0003D67E93 related cluster n=1 Tax=unknown RepID=UPI0003D67E93 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF11988.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu rbh
cobN; cobalt insertion protein CobN
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_26
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30996..31457)
DNA (462bp) protein (154aa)
UPI0003D5E2C6 related cluster n=1 Tax=unknown RepID=UPI0003D5E2C6
Uncharacterized protein {ECO:0000313|EMBL:ETI86727.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_27
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

31868..32836
DNA (969bp) protein (323aa)
UPI0003D68CE5 related cluster n=1 Tax=unknown RepID=UPI0003D68CE5 rbh
UPF0365 protein Q612_NSC00282G0007 {ECO:0000256|HAMAP-Rule:MF_01562}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativico rbh
hypothetical protein
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_28
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

32839..32952
DNA (114bp) protein (38aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI86723.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_29
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

32988..33116
DNA (129bp) protein (43aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI86722.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv
NECEvent2014_5_8_Negativicoccus_succinicivorans_52_30_scaffold_1_30
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

33214..33864
DNA (651bp) protein (217aa)
UPI0003D6101C related cluster n=1 Tax=unknown RepID=UPI0003D6101C rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI86721.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succiniciv rbh
Displaying items 1-30 of 345 in total

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