ggKbase home page

NECEvent2014_6_5_scaffold_329

Alias: 176_005_scaffold_329

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_329_1
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

65..1486
DNA (1422bp) protein (474aa)
stage V sporulation protein AF
Stage V sporulation protein AF {ECO:0000313|EMBL:CDM68747.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
NECEvent2014_6_5_scaffold_329_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1782..2537)
DNA (756bp) protein (252aa)
exodeoxyribonuclease III (EC:3.1.11.2)
Uncharacterized protein {ECO:0000313|EMBL:CCY41596.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
NECEvent2014_6_5_scaffold_329_3
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2884..4251)
DNA (1368bp) protein (456aa)
UPF0210 protein CCH01_014880 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF43
hypothetical protein UPF0210
NECEvent2014_6_5_scaffold_329_4
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4267..4536)
DNA (270bp) protein (90aa)
ACT domain-containing protein
UPF0237 protein CCH01_014890 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF43
NECEvent2014_6_5_scaffold_329_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4555..5535)
DNA (981bp) protein (327aa)
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:AIY78713.1}; EC=1.4.1.16 {ECO:0000313|EMBL:AIY78713.1};; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
diaminopimelate dehydrogenase (EC:1.4.1.16) rbh
NECEvent2014_6_5_scaffold_329_6
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5696..6640)
DNA (945bp) protein (315aa)
Uncharacterized protein {ECO:0000313|EMBL:EKY24024.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
NECEvent2014_6_5_scaffold_329_7
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6685..7353)
DNA (669bp) protein (223aa)
DNA-3-methyladenine glycosylase (EC:3.2.2.-)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=1216932 s
NECEvent2014_6_5_scaffold_329_8
unknown

Not on your lists

comp(7435..7569)
DNA (135bp) protein (45aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_329_9
Bacillus subtilis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7666..7980)
DNA (315bp) protein (105aa)
YbgB protein
Uncharacterized protein {ECO:0000313|EMBL:KFK80945.1}; TaxID=1495315 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus subtilis subsp. niger.;"
NECEvent2014_6_5_scaffold_329_10
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8144..8596
DNA (453bp) protein (151aa)
Acetyltransferase {ECO:0000313|EMBL:CEP44584.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
putative FemA-like peptidoglycan biosynthesisprotein
NECEvent2014_6_5_scaffold_329_11
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(8649..9113)
DNA (465bp) protein (155aa)
Putative regulatory protein {ECO:0000313|EMBL:CDE60199.1}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacteri
hypothetical protein
NECEvent2014_6_5_scaffold_329_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9533..11851)
DNA (2319bp) protein (773aa)
gshAB; glutathione biosynthesis bifunctional protein GshAB (EC:6.3.2.2 6.3.2.3)
Glutathione biosynthesis bifunctional protein GshAB {ECO:0000256|HAMAP-Rule:MF_00782}; Gamma-GCS-GS {ECO:0000256|HAMAP-Rule:MF_00782}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridi
NECEvent2014_6_5_scaffold_329_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11835..13163)
DNA (1329bp) protein (443aa)
mate efflux family protein
Mate efflux family protein {ECO:0000313|EMBL:ACD23595.1}; Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps {ECO:0000313|EMBL:CDH91515.1}; TaxID=935198 spe
NECEvent2014_6_5_scaffold_329_14
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13176..13451)
DNA (276bp) protein (92aa)
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:CDI50038.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 1
NECEvent2014_6_5_scaffold_329_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13657..15375)
DNA (1719bp) protein (573aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH98736.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
myosin-cross-reactive antigen
NECEvent2014_6_5_scaffold_329_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15498..15815
DNA (318bp) protein (106aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD21861.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklun
NECEvent2014_6_5_scaffold_329_17
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15865..16425)
DNA (561bp) protein (187aa)
p-loop ATPase {ECO:0000313|EMBL:CDB15536.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:2
P-loop ATPase
NECEvent2014_6_5_scaffold_329_18
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16607..16786
DNA (180bp) protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:EKY28353.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
NECEvent2014_6_5_scaffold_329_19
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16858..17283
DNA (426bp) protein (142aa)
Rubrerythrin family protein {ECO:0000313|EMBL:CDB14411.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostri
ferritin
NECEvent2014_6_5_scaffold_329_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17297..17842)
DNA (546bp) protein (182aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH97295.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hemerythrin HHE cation binding domain protein
NECEvent2014_6_5_scaffold_329_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17844..18458)
DNA (615bp) protein (205aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI91055.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_6_5_scaffold_329_22
unknown

Not on your lists

18608..18787
DNA (180bp) protein (60aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_329_23
unknown

Not on your lists

comp(18829..19350)
DNA (522bp) protein (174aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_329_24
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19377..19835)
DNA (459bp) protein (153aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ03594.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
DNA mismatch repair protein MutT
NECEvent2014_6_5_scaffold_329_25
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19835..21037)
DNA (1203bp) protein (401aa)
type I phosphodiesterase / nucleotide pyrophosphatase family protein
Type I phosphodiesterase / nucleotide pyrophosphatase family protein {ECO:0000313|EMBL:AIY84521.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
NECEvent2014_6_5_scaffold_329_26
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21069..21890)
DNA (822bp) protein (274aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH97185.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
metallo-beta-lactamase
NECEvent2014_6_5_scaffold_329_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22013..23164)
DNA (1152bp) protein (384aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH96521.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
malate dehydrogenase
NECEvent2014_6_5_scaffold_329_28
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23181..23783)
DNA (603bp) protein (201aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH96520.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
CutC family protein
NECEvent2014_6_5_scaffold_329_29
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23799..24758)
DNA (960bp) protein (320aa)
N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase (EC:3.5.1.26)
Uncharacterized protein {ECO:0000313|EMBL:EEH96519.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_6_5_scaffold_329_30
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25006..26589
DNA (1584bp) protein (528aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH96518.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
sigma-54 interaction domain protein
Displaying items 1-30 of 31 in total

View Taxonomy