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NECEvent2014_6_6_Clostridiales_50_23_scaffold_113

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_6_Clostridiales_50_23_scaffold_113_1
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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324..737
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4L193_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL01663.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (st
NECEvent2014_6_6_Clostridiales_50_23_scaffold_113_2
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

842..1129
DNA (288bp) protein (96aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A5N400_CLOK5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL05666.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040
NECEvent2014_6_6_Clostridiales_50_23_scaffold_113_3
Streptococcus constellatus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1268..1711
DNA (444bp) protein (148aa)
Uncharacterized protein n=4 Tax=Streptococcus constellatus subsp. pharyngis RepID=T1Z295_STRCV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAD43862.1}; TaxID=1035184 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group.;" source="
NECEvent2014_6_6_Clostridiales_50_23_scaffold_113_4
unknown

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1748..2179
DNA (432bp) protein (144aa)

This feature has no annotations

NECEvent2014_6_6_Clostridiales_50_23_scaffold_113_5
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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2233..2430
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZFI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13175.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
NECEvent2014_6_6_Clostridiales_50_23_scaffold_113_6
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2471..2827
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M093_CLOCD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV66900.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (str
NECEvent2014_6_6_Clostridiales_50_23_scaffold_113_7
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3014..3910
DNA (897bp) protein (299aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R816_CLOSW rbh
MerR family transcriptional regulator rbh
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ADL05670.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (str rbh
NECEvent2014_6_6_Clostridiales_50_23_scaffold_113_8
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3992..6790
DNA (2799bp) protein (933aa)
Uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=A5N3Z5_CLOK5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAH08461.1}; TaxID=583346 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain NBRC 1 rbh
NECEvent2014_6_6_Clostridiales_50_23_scaffold_113_9
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6787..8208
DNA (1422bp) protein (474aa)
Uncharacterized protein n=2 Tax=Listeria monocytogenes RepID=D2P2Z9_LISM1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL01654.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (st rbh
NECEvent2014_6_6_Clostridiales_50_23_scaffold_113_10
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8234..10036
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4L182_OSCVS rbh
Uncharacterized protein {ECO:0000313|EMBL:BAL01652.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (st rbh
hypothetical protein
NECEvent2014_6_6_Clostridiales_50_23_scaffold_113_11
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10051..10305
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A5N3Z1_CLOK5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDK35837.1}; TaxID=431943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain ATCC 8
NECEvent2014_6_6_Clostridiales_50_23_scaffold_113_12
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10483..10806)
DNA (324bp) protein (108aa)
Predicted transcriptional regulator n=3 Tax=Clostridium RepID=A5N3Z0_CLOK5
XRE family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:BAH08457.1}; TaxID=583346 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain NBRC 1
NECEvent2014_6_6_Clostridiales_50_23_scaffold_113_13
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10966..11151
DNA (186bp) protein (62aa)
conjugative transposon protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI000375A3AC
transposase
Predicted transposase {ECO:0000313|EMBL:EDK35832.1}; TaxID=431943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain ATCC 852
NECEvent2014_6_6_Clostridiales_50_23_scaffold_113_14
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11159..11824
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K9L9_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EGN40802.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;" rbh
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
NECEvent2014_6_6_Clostridiales_50_23_scaffold_113_15
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11821..12834
DNA (1014bp) protein (338aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinoph rbh
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7AQD0_9FIRM rbh
Signal transduction histidine kinase
NECEvent2014_6_6_Clostridiales_50_23_scaffold_113_16
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12931..13698
DNA (768bp) protein (256aa)
ABC transporter ATP-binding protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K963_9FIRM rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EGN40804.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA rbh
ABC-type antimicrobial peptide transport system, ATPase component
NECEvent2014_6_6_Clostridiales_50_23_scaffold_113_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13688..15922
DNA (2235bp) protein (745aa)
Uncharacterized protein n=5 Tax=root RepID=V8C067_RUMGN rbh
Uncharacterized protein {ECO:0000313|EMBL:ETD20131.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;" rbh
ABC-type transport system, involved in lipoprotein release, permease component
NECEvent2014_6_6_Clostridiales_50_23_scaffold_113_18
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16355..16768
DNA (414bp) protein (138aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R8H1_CLOSW
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADL05700.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyt
NECEvent2014_6_6_Clostridiales_50_23_scaffold_113_19
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17378..17758
DNA (381bp) protein (127aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=583346 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
mRNA interferase n=2 Tax=Clostridium kluyveri RepID=A5N3X5_CLOK5
hypothetical protein
NECEvent2014_6_6_Clostridiales_50_23_scaffold_113_20
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17773..18144
DNA (372bp) protein (124aa)
Recombinase-related protein n=1 Tax=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) RepID=A5N3X4_CLOK5
recombinase-like protein
Recombinase-related protein {ECO:0000313|EMBL:EDK35820.1}; TaxID=431943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain AT
NECEvent2014_6_6_Clostridiales_50_23_scaffold_113_21
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18156..18311
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4L171_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL01641.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (st
Displaying 21 items

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