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NECEvent2014_6_6_Clostridiales_50_23_scaffold_170_8

Organism: NECEvent2014_6_6_Clostridiales_50_23_plum

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(5281..5514)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S18 n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=RS18_SYMTH similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 73.0
  • Bit_score: 127
  • Evalue 7.00e-27
rpsR; 30S ribosomal protein S18 similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 73.0
  • Bit_score: 127
  • Evalue 2.00e-27
30S ribosomal protein S18 {ECO:0000255|HAMAP-Rule:MF_00270}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium therm similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 73.0
  • Bit_score: 127
  • Evalue 9.70e-27

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Taxonomy

Symbiobacterium thermophilum → Symbiobacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 234
ATGGCAAGACGAGAACGCGGCAGACGTTCCAGAAAGAAAGTCTGCAATTTTTGCGTCGATAAAGTCGATCACATCGACTACAAAGACAGCAACCGTCTGAAAAAATACATGACGGAACGCGGCAAGATTTTACCGCGTCGCATTACCGGCAATTGTGCCAAGCACCAACGTGCCGTTACGGTCGCTATTAAACGCGCTCGTGCGATGGCATTGCTGCCTTATTCCAACGACTGA
PROTEIN sequence
Length: 78
MARRERGRRSRKKVCNFCVDKVDHIDYKDSNRLKKYMTERGKILPRRITGNCAKHQRAVTVAIKRARAMALLPYSND*