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NECEvent2014_6_6_Clostridiales_50_23_scaffold_170

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_6_Clostridiales_50_23_scaffold_170_1
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..983)
DNA (981bp) protein (327aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO
guaA; GMP synthase (EC:6.3.5.2)
NECEvent2014_6_6_Clostridiales_50_23_scaffold_170_2
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(980..1525)
DNA (546bp) protein (182aa)
Probable hypoxanthine phosphoribosyltransferase n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AR46_DESPS
hypoxanthine phosphoribosyltransferase
Probable hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CAG35178.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;"
NECEvent2014_6_6_Clostridiales_50_23_scaffold_170_3
unknown

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1672..2028
DNA (357bp) protein (119aa)

This feature has no annotations

NECEvent2014_6_6_Clostridiales_50_23_scaffold_170_4
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2082..2270)
DNA (189bp) protein (63aa)
30S ribosomal protein S21 n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LSI3_TEPAE
rpsU; ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" so
NECEvent2014_6_6_Clostridiales_50_23_scaffold_170_5
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2406..2750)
DNA (345bp) protein (115aa)
Histidine triad (HIT) protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QV92_ACEAZ
histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:ADL12151.1}; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Acetohalobium.;" source="Acetohalobium arabati
NECEvent2014_6_6_Clostridiales_50_23_scaffold_170_6
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2796..4157)
DNA (1362bp) protein (454aa)
tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Centipeda periodontii DSM 2778 RepID=F5RIQ2_9FIRM rbh
tRNA methylthiotransferase YqeV {ECO:0000313|EMBL:CDD10096.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascol rbh
MiaB family RNA modification protein
NECEvent2014_6_6_Clostridiales_50_23_scaffold_170_7
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4170..4820)
DNA (651bp) protein (217aa)
Peptidase M50 n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJ60_ALKOO
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:ABW19842.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clo
NECEvent2014_6_6_Clostridiales_50_23_scaffold_170_8
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5281..5514)
DNA (234bp) protein (78aa)
30S ribosomal protein S18 n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=RS18_SYMTH
rpsR; 30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000255|HAMAP-Rule:MF_00270}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium therm
NECEvent2014_6_6_Clostridiales_50_23_scaffold_170_9
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5533..5982)
DNA (450bp) protein (150aa)
single-stranded DNA-binding protein n=1 Tax=Marinococcus halotolerans RepID=UPI0003B748DE
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=644966 species="Bacteria; Firmicutes; Clostrid
NECEvent2014_6_6_Clostridiales_50_23_scaffold_170_10
Pontibacillus chungwhensis, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6006..6296)
DNA (291bp) protein (97aa)
30S ribosomal protein S6 n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=RS6_DESRM
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=1385513 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Ponti
NECEvent2014_6_6_Clostridiales_50_23_scaffold_170_11
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6434..6775)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Enterococcus faecalis TX1342 RepID=E6FU41_ENTFL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFM81897.1}; TaxID=749495 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis TX4248.;"
NECEvent2014_6_6_Clostridiales_50_23_scaffold_170_12
Listeria ivanovii, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6793..8607)
DNA (1815bp) protein (605aa)
hypothetical protein n=1 Tax=Bacillus sp. FJAT-13831 RepID=UPI0003172566
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CBW85508.1}; TaxID=881621 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria ivanovii (strain ATCC BAA-678 / PAM 5
NECEvent2014_6_6_Clostridiales_50_23_scaffold_170_13
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8591..8968)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Bacillus sp. 123MFChir2 RepID=UPI0003809A64
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR71140.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27
NECEvent2014_6_6_Clostridiales_50_23_scaffold_170_14
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8981..9685)
DNA (705bp) protein (235aa)
glycosyl transferase family 2 n=1 Tax=Bacillus sp. 123MFChir2 RepID=UPI00037618AF
Glycosyltransferase, group 2 family {ECO:0000313|EMBL:EDX67288.1}; TaxID=451707 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cer
hypothetical protein
NECEvent2014_6_6_Clostridiales_50_23_scaffold_170_15
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9884..11326)
DNA (1443bp) protein (481aa)
nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1121335 species= rbh
Nicotinate phosphoribosyltransferase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VS75_CLOSH rbh
NECEvent2014_6_6_Clostridiales_50_23_scaffold_170_16
Paenibacillus polymyxa, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11340..12194)
DNA (855bp) protein (285aa)
ADP-ribose pyrophosphatase n=1 Tax=Paenibacillus polymyxa CR1 RepID=V5WVN8_PAEPO
ADP-ribose pyrophosphatase
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:KEO77523.1}; TaxID=1406 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus polymyxa (Bacillus pol
NECEvent2014_6_6_Clostridiales_50_23_scaffold_170_17
Acinetobacter sp. CIP 110321, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12202..13065)
DNA (864bp) protein (288aa)
TIGR01619 family protein n=1 Tax=Acinetobacter sp. CIP 110321 RepID=R9B0F9_9GAMM
TIGR01619 family protein {ECO:0000313|EMBL:EOR07984.1}; TaxID=1217699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp.
hypothetical protein
NECEvent2014_6_6_Clostridiales_50_23_scaffold_170_18
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


13291..14397
DNA (1107bp) protein (369aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840};; Methionyl-tRNA synthetase {ECO: rbh
Methionine--tRNA ligase n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DLX7_DESRL rbh
methionyl-tRNA synthetase
Displaying 18 items

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