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NECEvent2014_6_6_Clostridiales_50_23_scaffold_170_9

Organism: NECEvent2014_6_6_Clostridiales_50_23_plum

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(5533..5982)

Top 3 Functional Annotations

Value Algorithm Source
single-stranded DNA-binding protein n=1 Tax=Marinococcus halotolerans RepID=UPI0003B748DE similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 161.0
  • Bit_score: 155
  • Evalue 6.00e-35
single-strand binding protein similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 150.0
  • Bit_score: 154
  • Evalue 2.20e-35
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=644966 species="Bacteria; Firmicutes; Clostrid similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 150.0
  • Bit_score: 154
  • Evalue 1.10e-34

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Taxonomy

Thermaerobacter marianensis → Thermaerobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 450
ATGAATAAAATCATTCTGATCGGTCGCCTAGTAGCAGACCCCGAATTACGGTATACACAAAGCGGTATTCCTGTATGTAATTTTAGACTGGCAGTGGACAGACCTTATACAAACCAGAGTGGTGAGCGAGAAGCCGATTTCATTGATGTTGTGGTGTGGCGCAAAACGGCAGAAAACGTGGCGAAATTTATGAGTAAAGGTCGCCAAGTGGCCGTTGAAGGTGCACTGCAAATTCGCAGTTATGAGGATAACAACGGCATTCGTCGTCGGACCGCTGAAGTCCAGGCCAATAGCGTGGAATTTTTAGGTGGTGGCGGTCGTGCTCAGCAGGAGGACGGCTTCAGTCAAGGCGCTTCGCAGAATAATTTTTCCGCACCCCAGCGTCCGGCTGCGCCGCAAGGCGGTTTCGGTGAGGAAGTCACCTTTGACGATGACGACCTGCCTTTTTAA
PROTEIN sequence
Length: 150
MNKIILIGRLVADPELRYTQSGIPVCNFRLAVDRPYTNQSGEREADFIDVVVWRKTAENVAKFMSKGRQVAVEGALQIRSYEDNNGIRRRTAEVQANSVEFLGGGGRAQQEDGFSQGASQNNFSAPQRPAAPQGGFGEEVTFDDDDLPF*