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NECEvent2014_6_6_Clostridiales_50_23_scaffold_175_10

Organism: NECEvent2014_6_6_Clostridiales_50_23_plum

near complete RP 47 / 55 MC: 2 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 4595..5188

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MJ23_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 197.0
  • Bit_score: 242
  • Evalue 2.90e-61
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 197.0
  • Bit_score: 242
  • Evalue 4.10e-61
SSU ribosomal protein S4P similarity KEGG
DB: KEGG
  • Identity: 58.4
  • Coverage: 197.0
  • Bit_score: 235
  • Evalue 1.30e-59

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Taxonomy

Lachnospiraceae bacterium 3-2 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 594
ATGGCAAGAAACAGAGAACCCATCGTTAAGCGTTGCCGCGCTCTGGGGATTTCCCCGGCCTATCTGGGCTACAGCAAATCCTCCAAACGCGTTCCGTCACGTGGCCGCAAAAAATTGAGCGAATACGGCATGCAGCTGCAAGAAAAGCAAAAAGCTAAATTTATCTATGGGGTTATGGAAAAACCGTTCATCAACTACTACAAAAAAGCCAATCGTATGAGCGGCATGACCGGTGAAAACCTCATCATTCTCTTGGAAAAACGTTTGGACAACATCGTCTGGCGTGCCGGCTTTGCCAAAACTCGCCGGGAAGCCCGTCAAATGGTTGTACACAATCATTTCACCGTCAACGGCAAAAAAGCCAATATTCCTTCCATGGAAATGTCCGTCGGCGATGTGATTGAACTCAAAGACAAGAGCGCCCAATCTCCTCACTTTAAAGCACATGTGGACGCACTCGGTGTCGTAGCACCGCCGGCTTGGCTTCAATTAGATACCAATAACCGTTCCGTAGCGGTTGTTGCAGAGCCGACCCGTGAAGAAATCGACATTCCTGTTGATGAACAGATGATCGTCGAGCTCTACAGCAAGTAA
PROTEIN sequence
Length: 198
MARNREPIVKRCRALGISPAYLGYSKSSKRVPSRGRKKLSEYGMQLQEKQKAKFIYGVMEKPFINYYKKANRMSGMTGENLIILLEKRLDNIVWRAGFAKTRREARQMVVHNHFTVNGKKANIPSMEMSVGDVIELKDKSAQSPHFKAHVDALGVVAPPAWLQLDTNNRSVAVVAEPTREEIDIPVDEQMIVELYSK*