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NECEvent2014_8_1_Clostridium_paraputrificum_29_36

NECEvent2014_8_1_Clostridium_30_43
In projects: NECEvent2014_8_1

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Description

rpS3 100% to Clostridium paraputrificum

Displaying items 201-233 of 233 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_1_scaffold_4383 178_001_scaffold_4383
Species: Clostridium baratii (50%)
2 1057 bp 23.65 10.22 96.22
NECEvent2014_8_1_scaffold_4130 178_001_scaffold_4130
Species: Enterococcus columbae (50%)
2 1123 bp 24.04 10.15 69.72
NECEvent2014_8_1_scaffold_1580 178_001_scaffold_1580
Species: Clostridium perfringens (50%)
2 3004 bp 29.06 8.09 98.97
NECEvent2014_8_1_scaffold_4149 178_001_scaffold_4149
Species: Clostridium sp. CAG:356 (50%)
2 1118 bp 23.79 8.59 97.14
NECEvent2014_8_1_scaffold_2364 178_001_scaffold_2364
Species: [Clostridium] termitidis (50%)
2 1985 bp 26.35 16.85 78.44
NECEvent2014_8_1_scaffold_3390 178_001_scaffold_3390
Species: Clostridium pasteurianum (50%)
2 1380 bp 28.12 21.96 88.70
NECEvent2014_8_1_scaffold_3142 178_001_scaffold_3142
Species: Clostridium butyricum (50%)
2 1489 bp 26.93 18.44 67.50
NECEvent2014_8_1_scaffold_2889 178_001_scaffold_2889
Species: Clostridium celatum (50%)
2 1635 bp 27.65 22.75 75.60
NECEvent2014_8_1_scaffold_2635 178_001_scaffold_2635
Species: Clostridium sp. DL-VIII (50%)
2 1785 bp 26.27 17.48 98.66
NECEvent2014_8_1_scaffold_2380 178_001_scaffold_2380
Species: Clostridium sp. IBUN125C (50%)
2 1968 bp 27.85 13.87 94.21
NECEvent2014_8_1_scaffold_4458 178_001_scaffold_4458
Species: Terrisporobacter othiniensis (50%)
2 1038 bp 25.53 14.74 91.33
NECEvent2014_8_1_scaffold_3971 178_001_scaffold_3971
Species: Clostridium butyricum (50%)
2 1168 bp 24.83 17.72 47.26
NECEvent2014_8_1_scaffold_1424 178_001_scaffold_1424
Species: Terrisporobacter othiniensis (50%)
2 3353 bp 31.08 61.02 91.53
NECEvent2014_8_1_scaffold_2716 178_001_scaffold_2716
Species: Lachnospiraceae bacterium COE1 (50%)
2 1734 bp 26.93 16.61 76.47
NECEvent2014_8_1_scaffold_3487 178_001_scaffold_3487
Species: Clostridium saccharobutylicum (50%)
2 1340 bp 26.42 10.30 93.81
NECEvent2014_8_1_scaffold_2217 178_001_scaffold_2217
Species: Clostridium baratii (50%)
2 2135 bp 28.20 21.92 85.29
NECEvent2014_8_1_scaffold_1976 178_001_scaffold_1976
Species: uncultured archaeon (50%)
2 2413 bp 25.32 12.68 98.47
NECEvent2014_8_1_scaffold_3271 178_001_scaffold_3271
Species: Clostridium perfringens (100%)
2 1432 bp 30.38 39.70 81.28
NECEvent2014_8_1_scaffold_1993 178_001_scaffold_1993
Species: [Clostridium] hiranonis (50%)
2 2389 bp 24.32 8.04 68.19
NECEvent2014_8_1_scaffold_2258 178_001_scaffold_2258
Species: Clostridium baratii (50%)
2 2090 bp 29.43 28.42 97.75
NECEvent2014_8_1_scaffold_2782 178_001_scaffold_2782
Species: Clostridium baratii (100%)
2 1698 bp 34.63 158.75 99.82
NECEvent2014_8_1_scaffold_3058 178_001_scaffold_3058
Species: Clostridium sp. CAG:221 (50%)
2 1530 bp 24.97 9.41 88.24
NECEvent2014_8_1_scaffold_2821 178_001_scaffold_2821
Species: Clostridium sp. Maddingley MBC34-26 (50%)
2 1673 bp 25.52 11.75 99.16
NECEvent2014_8_1_scaffold_2054 178_001_scaffold_2054
Species: Clostridium botulinum (50%)
2 2315 bp 29.76 35.51 86.83
NECEvent2014_8_1_scaffold_2571 178_001_scaffold_2571
Species: Clostridium butyricum (50%)
2 1831 bp 27.14 70.13 93.88
NECEvent2014_8_1_scaffold_2073 178_001_scaffold_2073
Species: Clostridium botulinum (100%)
1 2293 bp 32.40 75.95 78.50
NECEvent2014_8_1_scaffold_3901 178_001_scaffold_3901
Species: Clostridium sp. 7_2_43FAA (100%)
1 1188 bp 25.93 17.17 93.69
NECEvent2014_8_1_scaffold_3648 178_001_scaffold_3648
Species: Clostridium sartagoforme (100%)
1 1277 bp 23.02 11.51 95.14
NECEvent2014_8_1_scaffold_3394 178_001_scaffold_3394
Species: Clostridium sp. 7_2_43FAA (100%)
1 1379 bp 24.87 12.29 99.86
NECEvent2014_8_1_scaffold_3664 178_001_scaffold_3664
Species: Intestinibacter bartlettii (100%)
1 1270 bp 25.98 18.19 99.92
NECEvent2014_8_1_scaffold_3932 178_001_scaffold_3932
Species: Clostridium sartagoforme (100%)
1 1180 bp 28.98 44.62 68.90
NECEvent2014_8_1_scaffold_2020 178_001_scaffold_2020
Species: Clostridium butyricum (100%)
1 2353 bp 30.26 28.81 59.67
NECEvent2014_8_1_scaffold_4369 178_001_scaffold_4369
Species: Enterococcus faecalis (100%)
1 1061 bp 32.80 30.11 49.76
Displaying items 201-233 of 233 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.